Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0752 |
Symbol | |
ID | 3672936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 796193 |
End bp | 797926 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637709430 |
Product | pilus assembly pathway ATPase PilB |
Protein accession | YP_314510 |
Protein GI | 74316770 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.440841 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGACCG AGACCGTTCC GCCGGCCGCC GCGCCCGCGG CGCGCCAGAA AATCCGCCTC GGCGATCTGC TCGTCGAACA GAAGGTCATT TCGGCCGCCG ACCTCGATAT CGCGCTGACG GCGCAGAAGA AGAGCGGACG GCGGCTGGGC CGCATCATCG TCGAGTCGGG CCTCGCCGGG GAGAACGACA TCGCCCAGGC GCTGGCCCGC CAACTCGCGA TTCCCTTCGT CGACCTCCGG AAATTCAACC CCGACCCGTC GATCCTGCAG TTGCTCGGGG AGACCCAGGC GCGGCGCTTC CGCGCGATTC CGCTCGGCCG GCGCGAAGGC GACATCTTCG TCGGCATGGC CGACCCGACC GACCTGTTCG CCTACGACGA GGTCGCGCGC CTGATCGAGG GCGGCATCCA GCTCGCAGTC GTCGCCGAGG GCGATCTCCT GTCGGCGATC GACCGCCTGT ACCGGCGCAC CGACGACATC CACGGCCTGA CCGAGGAACT CGCACGCGAC ATGGGCGAGA GCGAGGCCAG CATCATCGGC CTCGACGCGC TCGGCGAAGG CCAGGCCGAC GCGCCGGTGG TGCGGCTGCT GCAGACGCTG TTCGAGGACG CACTGCAGGT CAACGCCTCG GACGTGCATA TCGAGCCGCA GGAAAAGCAG CTCATGATCC GCTTTCGCAT CGACGGCGTG CTGCATCGGC AGACCGAGGC CGACCTCAGG ATCGCCCCCG CGCTGGCGCT GCGCCTGAAG ATCGTCTCCG GGCTCGACAT TTCGGAGAAG CGGCTGCCGC AGGACGGCCG CTTCGCCGTC AAGGTGCGCG GCCGCACCGT CGACGTGCGC CTGTCGACGA TGCCGACGCA ATACGGCGAA TCGGTCGTGA TGCGCCTCCT GAGCCAGGGC GACAACGCGC CGACGCTCGA CACGCTGGGC ATGCCGCCCG CGATGCTCGA ACGCTTCCGC GCGATCCTGC ACCGCCCCAA CGGCCTCGTC CTCGTCACCG GCCCGACCGG CAGCGGCAAG ACGACGACGC TCTATGCCGC GCTCGGCGAA CTCAACGACC CGGGCACCAA GATCATCACG GTCGAGGACC CGGTCGAATA CCGCCTGCCC GGTGTCAACC AGGTCCAGGC CAACGACAAG ATCGACCTCA GCTTCGCGCG GGTGCTGCGC GCGATGCTGC GCCAGGACCC CGACGTCATC CTGGTCGGCG AGATGCGCGA CCCCGAGACT GCGCAGATCG CGCTGCGCGC CGCGATGACG GGCCATCTCG TACTCTCGAC GCTGCACACC AACGACGCCG CGTCGACGCC GGTGCGCCTG CTCGACATGG GCGTGCCGTC GTTCATGGTC GCGACCTCGG TTCAGGGCGT GCTTGCGCAG CGCCTGCTGC GCAAGGTCTG CGAACACTGC AAGGCGCCGC ATGTGCCGAC CCCCCAGGAA CGCGTGTGGC TCGGCGCGGC CTATGCCGAG GGCGACGCCT ACGTGGCGGG ACGCGGCTGC GAGCGCTGCC ACGGCACGGG CCACGCCGGC CGCCAGGCGA TCCACGAACT GCTCGAGATC AGCGCGCCGC TCGCCGACGC GCTCGCGCGC AAGCCGCCGG CCGAGTTCGT CCTCGCCGCT CGCGCCGAAC TCGCCGGCCG CACGCTGCGC GATCAGGCGC TCGCGCTCGC GCGCAGCGGC GTCGCCTCGC TGTCCGAGGC GATGCGGGTC AGCGCGCAGG ACGAGACGCA CTGA
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Protein sequence | MLTETVPPAA APAARQKIRL GDLLVEQKVI SAADLDIALT AQKKSGRRLG RIIVESGLAG ENDIAQALAR QLAIPFVDLR KFNPDPSILQ LLGETQARRF RAIPLGRREG DIFVGMADPT DLFAYDEVAR LIEGGIQLAV VAEGDLLSAI DRLYRRTDDI HGLTEELARD MGESEASIIG LDALGEGQAD APVVRLLQTL FEDALQVNAS DVHIEPQEKQ LMIRFRIDGV LHRQTEADLR IAPALALRLK IVSGLDISEK RLPQDGRFAV KVRGRTVDVR LSTMPTQYGE SVVMRLLSQG DNAPTLDTLG MPPAMLERFR AILHRPNGLV LVTGPTGSGK TTTLYAALGE LNDPGTKIIT VEDPVEYRLP GVNQVQANDK IDLSFARVLR AMLRQDPDVI LVGEMRDPET AQIALRAAMT GHLVLSTLHT NDAASTPVRL LDMGVPSFMV ATSVQGVLAQ RLLRKVCEHC KAPHVPTPQE RVWLGAAYAE GDAYVAGRGC ERCHGTGHAG RQAIHELLEI SAPLADALAR KPPAEFVLAA RAELAGRTLR DQALALARSG VASLSEAMRV SAQDETH
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