Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0734 |
Symbol | |
ID | 3673825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 777404 |
End bp | 778132 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637709412 |
Product | putative short chain dehydrogenase |
Protein accession | YP_314492 |
Protein GI | 74316752 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.491859 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCGCAC TGACTGACCA GGTGGTAGTC GTCACCGGAG GCGGGCGAGG CCTGGGCGCC TCGATCTGCC GCGCGCTTTC ACGCGAAGGC GCCAAGATCG CCGTGATGGA CGTCGACGGC AAGGCCGCGC GCCGCGAGGC CGCCGCGCTC ACCGACAAGG GCGCCGACGC CCTCGCCCTC GAAACCGACG TCGGCAGCGA GGCGCAGGTC AAGGCTGCGA TCGCGGAGGT CGTCGCGCGC TTCGGCCGCC TCGACGCGCT CGTCAACAAC GCCGGCATCG ACAAGACCTG CAGCGTCGAA GAACTCGCCT GCGACGAGTG GGAGCGCATC CTGCGCACCA ACCTGAGCGG CCCGTTCATG CTCGCCAAAT ACGCGGCCGA GCAAATGCGC GCGCAGGGCA ACGGCGGGCA GATCGTCAAC ATCGCGTCGA CCGCCGCCAA GCGCGCCTGG GCCAACGCGT CGGCCTATCA CGCGTCGAAG TGGGGCCTCG TCGGGCTGTC GCAGGCCTTG CACGTCGAAC TGCGGCCCGA GGGCATCAAG GTGACGACGG TCATCGCCGG CGGCATGCGC ACGCCGTTCC TGCTCGAACG CTTTCCCGAT CTCGACCCCG GCCTGCTGCA GGACCCGGAC AACGTCGCCG ACACCGTGCG CTATCTGCTG ACGCTGCCGG CGGAGAGCGT GATCGCCGAG ATCATGGTGC TGCCGATGCG CGAAACCTCC TGGCCCTGA
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Protein sequence | MAALTDQVVV VTGGGRGLGA SICRALSREG AKIAVMDVDG KAARREAAAL TDKGADALAL ETDVGSEAQV KAAIAEVVAR FGRLDALVNN AGIDKTCSVE ELACDEWERI LRTNLSGPFM LAKYAAEQMR AQGNGGQIVN IASTAAKRAW ANASAYHASK WGLVGLSQAL HVELRPEGIK VTTVIAGGMR TPFLLERFPD LDPGLLQDPD NVADTVRYLL TLPAESVIAE IMVLPMRETS WP
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