Gene Tbd_0734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0734 
Symbol 
ID3673825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp777404 
End bp778132 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content70% 
IMG OID637709412 
Productputative short chain dehydrogenase 
Protein accessionYP_314492 
Protein GI74316752 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.491859 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGCAC TGACTGACCA GGTGGTAGTC GTCACCGGAG GCGGGCGAGG CCTGGGCGCC 
TCGATCTGCC GCGCGCTTTC ACGCGAAGGC GCCAAGATCG CCGTGATGGA CGTCGACGGC
AAGGCCGCGC GCCGCGAGGC CGCCGCGCTC ACCGACAAGG GCGCCGACGC CCTCGCCCTC
GAAACCGACG TCGGCAGCGA GGCGCAGGTC AAGGCTGCGA TCGCGGAGGT CGTCGCGCGC
TTCGGCCGCC TCGACGCGCT CGTCAACAAC GCCGGCATCG ACAAGACCTG CAGCGTCGAA
GAACTCGCCT GCGACGAGTG GGAGCGCATC CTGCGCACCA ACCTGAGCGG CCCGTTCATG
CTCGCCAAAT ACGCGGCCGA GCAAATGCGC GCGCAGGGCA ACGGCGGGCA GATCGTCAAC
ATCGCGTCGA CCGCCGCCAA GCGCGCCTGG GCCAACGCGT CGGCCTATCA CGCGTCGAAG
TGGGGCCTCG TCGGGCTGTC GCAGGCCTTG CACGTCGAAC TGCGGCCCGA GGGCATCAAG
GTGACGACGG TCATCGCCGG CGGCATGCGC ACGCCGTTCC TGCTCGAACG CTTTCCCGAT
CTCGACCCCG GCCTGCTGCA GGACCCGGAC AACGTCGCCG ACACCGTGCG CTATCTGCTG
ACGCTGCCGG CGGAGAGCGT GATCGCCGAG ATCATGGTGC TGCCGATGCG CGAAACCTCC
TGGCCCTGA
 
Protein sequence
MAALTDQVVV VTGGGRGLGA SICRALSREG AKIAVMDVDG KAARREAAAL TDKGADALAL 
ETDVGSEAQV KAAIAEVVAR FGRLDALVNN AGIDKTCSVE ELACDEWERI LRTNLSGPFM
LAKYAAEQMR AQGNGGQIVN IASTAAKRAW ANASAYHASK WGLVGLSQAL HVELRPEGIK
VTTVIAGGMR TPFLLERFPD LDPGLLQDPD NVADTVRYLL TLPAESVIAE IMVLPMRETS
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