| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0717 |
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| Symbol | |
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| ID | 3673808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 756309 |
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| End bp | 757517 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637709395 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_314475 |
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| Protein GI | 74316735 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0591874 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTGA GGCTCGCCGA GGTGTTCGCC CACCTGCGCG AAGCCGAAGC CGAGGCCGGC
GCGCCCCTGT GCGCCTACCT CTACGACCTC GCCGCGCTCG ACGCACACGC CGCGGCGCTC
GCCGCGAGCC TGCCGCCGGG CTGCGACCTC TTCTACGCGA TCAAGGCTAA TTCCGATCTG
CCGATCCTGC AGACGCTGGC GCCGCACGTC GCCGGCTTCG AGGTCTCGTC GGGCGGCGAA
CTCGCCTGGG TGCGCGCACA TTTCGCCGAG ATCCCGGTGA TCTTCAGCGG GCCGGGCAAG
CTCGACGACG AGCTCCGGCA GGCGCTCGAA CACGGCGTCG ATTGCCTGCA TGTCGAGAGC
CGGCACGAAT TGCAGCGGCT CGCAGAAATC GCGGCCCGGC TCGGTCGTAC CGCGCCTGTG
GCCCTGCGCG TCAACCTTAC GCTCGACGCG CTCGCCGAGA CCCCGCTCAT GATGGGCGGC
AAGCCGACGC CGTTCGGCAT TCCGACCGAG CAGCTGCCGG CATGCCTGGA CTGGCTGCGC
GAGCGGCCCG AGATCCGCCT GCGCGGCCTG CATTTCCACC TGCTGTCGCA CCAGCTCGAT
GCCGCCGCGC ACCTACGGCT CGTCGCGGCC TACCTCGCGC AGACCCGCCG CTGGTGCGAG
GCGCACGGCC TCGCCCTCGA CCACGTCAAC GTCGGCGGCG GCATCGGCAT CAACTACCGC
GAGCCCGCCC GGCAGTTCGA CTGGCCCGCG TTCAGCGCCG GGCTCGCATC GCTGCTGCAC
GAAGCCGGCC TGCCGGGCGT GCGCGTGCGC TTCGAACTCG GCCGCTATGT GACCGCCGCC
TGCGGCTACT ACGCGATGCA GGTCGTCGAC ATCAAGCACA GCCATGGCAA GACCTTCGTC
GTCGGCCGCG GCGGCTCGCA TCACTTCCGC ACGCCCTACG CGCAAGGCCA CAGCCACCCC
TTCCACGTGC TGCCGGTCGA TGACTGGCCG TATGCGTTCG CGCGCCCGCA GGCGGCGGAT
CAGCGCGTCA GCGTCGTCGG CCAGCTGTGC ACGCCGAAGG ACCTGCTGGC CTTCGACGCC
CCGGTCGAAT CGGTGCGCTG CAACGACGTG CTGGTCTTTC CCTACGCCGG CGCCTATGCC
TGGCACATCT CGCATCACGA CTTCCTGCGC CACCCGCATC CGGCGCAGTG GTACCTGCCC
GTGGAGTGA
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| Protein sequence | MELRLAEVFA HLREAEAEAG APLCAYLYDL AALDAHAAAL AASLPPGCDL FYAIKANSDL
PILQTLAPHV AGFEVSSGGE LAWVRAHFAE IPVIFSGPGK LDDELRQALE HGVDCLHVES
RHELQRLAEI AARLGRTAPV ALRVNLTLDA LAETPLMMGG KPTPFGIPTE QLPACLDWLR
ERPEIRLRGL HFHLLSHQLD AAAHLRLVAA YLAQTRRWCE AHGLALDHVN VGGGIGINYR
EPARQFDWPA FSAGLASLLH EAGLPGVRVR FELGRYVTAA CGYYAMQVVD IKHSHGKTFV
VGRGGSHHFR TPYAQGHSHP FHVLPVDDWP YAFARPQAAD QRVSVVGQLC TPKDLLAFDA
PVESVRCNDV LVFPYAGAYA WHISHHDFLR HPHPAQWYLP VE
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