| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0715 |
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| Symbol | |
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| ID | 3673806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 753230 |
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| End bp | 755326 |
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| Gene Length | 2097 bp |
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| Protein Length | 698 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637709393 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_314473 |
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| Protein GI | 74316733 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.133381 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTCC GTCTCTCCGC GCTGGCAGGC GCGCTTTCGC TCGCGTTCTC GGCGTCACCG
GTCAACGCCC AGACTCCGCA GGAAAACCCG CCCGGCGAAC TCGACACGGT CACCGTCTGG
TCGGAATACG CGGGCAGCTT CAAGTCCGAC ACGGTCCAGG TCGGCACCTT CCGCGAGGCG
TCGCCGCTCG ACGTGCCGCA GACCAGCAAC GTCGTGACGC GCGAAGTGCT CGACGCGCAG
GCCGCGTCGA CGCTGTTCGG CGCCTTGCGC AACACCGCGG GGGTCACCCG CTCGCAACTC
AACGGCTCGA CCTACGACAA CATCGCGATC CGCGGCATCC TGGTCGAGAA CCGCGGCAAC
TACCGGCTCA ACGGCTCCTT GCCGATCATC AACCTGATCG ATGTGCCGCT CGAAAACAAG
GAGCGCGTCG AAGTGCTCAA GGGCGCCTCG TCGCTCTACT ACGGCTTCGT GCCGCCGTCG
GGCATCGTGA ACCTCGTCAC CAAGCGCGCG GGCAAGGACC CGGTGTCGAG CCTGGCGCTG
TCGGCCAACC ACTACGGCGG CGCCAATGTG CACGCCGACG TCGGCCGGCG CTTCGGTGAA
GAGCAGCAGT TCGGCGCACG CGTCAATCTG CTTGCCGGCC GCGAGGATAT CGGCGTCGAC
AACTACTCTG GCGACCGCTC CCTCGGCGCG GTCGCGTTCG ACTGGCAGGC CAGCGACGCG
CTGTCGTTCA AGCTCGACGT CGAGCACTAC CGCAAGGACG TTTCCGAGCA AGCGGCGATC
AAAGTGCTGG CCCCGAACGC AGACGGGACG ATCACGCTGC CCGCCATTCC GGACGCCCGG
ACCAATCTTG CGGGCGAATG GCAGACCTAC GACGCCGACG CGACCAACGT GCTCTTCCGT
ACCGACTACG TGCTGAGCGA CGACTGGGGT TTGCTGCTCG AAGCCGGCCA CGCGCAGACC
AACCGCGACC GACGCTTCTC CCAGTTCGAG AACTACAACC TCGCGACCGG GGACGGCACG
CTGAAAATCT TCTTCAGCCC GAACCAGGAA TACGAGAACA GCAACTACCG CGCCGAGAGC
TTCGGTCACA TCCCCGGCAC CTGGGTCAGC CACGACCTCT CGTTCGGCTA CACCGCGAAC
CAGCGCGACC AGAATTCCCG TTCCGGCGGC AGCGTCAGCG TCGCGCAGAA CCTCTACGAC
CCGACCGAGG TGCCGGAACA GACCGCCCCC TCGGCCCCGA GCCACAACCC GTCCACGATC
GAGGATCGCG GCTGGTATCT GTTCGACCGC ATGTCTTTCG GCGAAAAGTG GCAACTCATG
CTCGGCGCGC GCGCCAGCCG TTATGTGAGC GAAACGACGA GCACGCGCTA CGAGGCGGAC
GACGTCAATC CGTCCGTCGC GATCATGTAC AAGCCGGTCG CCGGCGTGTC GGTCTATGGC
AGCTATCTCG AGGGCCTCGA GGAAAGCGGC CAGGCGCCGG CCCACCGCGC CAACGCCGGC
GAGCTGCTGC CGCCTGCGCT GTCGAAGCAG AAGGAAATCG GCGTCAAGGC CGAGGTAGCG
CAAGGCGTCC TGCTGCAGGC CGCGTATTTC GACATCGAGC GCCCCTCGAC GACGGTCGAC
GCGTCCAACC GCTTCGTCCT CAACGGCCTC GCCCAGTACC GCGGCATCGA ACTCGCGGCC
AGCGGCGAAG TCACGCGCTA CCTGGCGCTG ATCGGGTCCG CCCTCTTTCT CGACGCCGAG
CAGCAGAACG CAGCCAACCC GGCGACCTTC GGCAAGGTGC CGGACAATAC GCCCGAGCGC
ACGGCGAGCC TGTTCGCGGA ATACCGGCTG CCCGCTGTGC CGGGGCTCGC GCTGAGCGGC
GGCCTCTACT ACGTCGGCAA GCGCCCGGTG GACAACGAAA ACCGCGCCTT CGTCGACGGC
TACACGACGC TTTCGCTCGG CGCCCGCCAC AGCACGAAGC TGAATGGCAA GCGCACGACC
TTCCAGGCCG TCGTCGACAA TGTGACCAAC GAAAGCTACT GGAGCACGGC GGGCAACGGC
CTGCTCGGCG TCGGCGCGCC GCGCACGCTG AAGCTGACGG CAAAGGTCGA GTTCTGA
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| Protein sequence | MKFRLSALAG ALSLAFSASP VNAQTPQENP PGELDTVTVW SEYAGSFKSD TVQVGTFREA
SPLDVPQTSN VVTREVLDAQ AASTLFGALR NTAGVTRSQL NGSTYDNIAI RGILVENRGN
YRLNGSLPII NLIDVPLENK ERVEVLKGAS SLYYGFVPPS GIVNLVTKRA GKDPVSSLAL
SANHYGGANV HADVGRRFGE EQQFGARVNL LAGREDIGVD NYSGDRSLGA VAFDWQASDA
LSFKLDVEHY RKDVSEQAAI KVLAPNADGT ITLPAIPDAR TNLAGEWQTY DADATNVLFR
TDYVLSDDWG LLLEAGHAQT NRDRRFSQFE NYNLATGDGT LKIFFSPNQE YENSNYRAES
FGHIPGTWVS HDLSFGYTAN QRDQNSRSGG SVSVAQNLYD PTEVPEQTAP SAPSHNPSTI
EDRGWYLFDR MSFGEKWQLM LGARASRYVS ETTSTRYEAD DVNPSVAIMY KPVAGVSVYG
SYLEGLEESG QAPAHRANAG ELLPPALSKQ KEIGVKAEVA QGVLLQAAYF DIERPSTTVD
ASNRFVLNGL AQYRGIELAA SGEVTRYLAL IGSALFLDAE QQNAANPATF GKVPDNTPER
TASLFAEYRL PAVPGLALSG GLYYVGKRPV DNENRAFVDG YTTLSLGARH STKLNGKRTT
FQAVVDNVTN ESYWSTAGNG LLGVGAPRTL KLTAKVEF
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