Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0647 |
Symbol | |
ID | 3672612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 687863 |
End bp | 689071 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637709319 |
Product | serine-type D-ala-D-ala-carboxypeptidase |
Protein accession | YP_314405 |
Protein GI | 74316665 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGGTAA GATTTCCCGC TTTAATTTCC AGCCCTGTCG CGACCGAGCC AATGTCCCTG ACCTCACGCC TTGCCGCCGT TTTTCTGCTG TTCGTCCCCC TCGCCGCCGC CGCCGCCGCA GCGGTCGTTC CCCCGCCCCC TGAACTCGCG GCCAAATCCT GGGTGTTGAT GGATGCCGCG AGCGGCAGCG TCCTCGTCGA TCATCGTGGA CGCGAGCGCC TGCCGCCGGC GAGCCTGACC AAGCTCATGA CCTCGCACGT CGCCGCGCTC GAACTCCAGC GCGGCCGCAT CAAGGAGAAC GACCTCGTCA CGATCAGCGA AAAAGCCTGG CGCATGGGCG GCTCGAAAAT GTTCGTCCGC GTCGGCAACC AGGTCGCGGT GCACGATCTG CTGCGCGGCA TCATCGTGCA GTCGGGCAAC GACGCGAGCA TCGCGCTCGC CGAGCATCTG GCGGGCGGCG AGGATACCTT CGCCGCGCTC ATGAATCAGG AAGCGAAGCG GCTGGGCCTC GCCGACACGC ATTTCGTCAA CGCCACGGGC TGGCCGGCCG AAGGCCATTA CTCGAGCGCG CTCGACATGG CCAAGCTTGC GCGCGCGATC ATCATCGAGG ACCCCGCGCA CTACGGCCTC TACGCCGAAA AGGAATTCGT CTGGAACGGT ATCAAGCAGC CGAACCGCAA TCTGCTGCTG TGGCGTGACC CGTCGGTCGA CGGCCTGAAG ACCGGCCACA CCGAGGAAGC CGGTTATTGC CTCGTCGCGT CGAGCCAGCG CGACGGCCAG CGCATGATCG CCGCCGTGTT CGGCACGGAA AGCGAAGCCG CGCGCGCGAC CGAAACCGCG AAACTGCTCG CCTACGGCTT CAACTTCTTC GACAGCAAGA CCTTCTTCAA GAAAGGTCAG GCGGTGCAGA CCGTCGAGGT GTGGAAAGGC GCCGCGCGCA CGCTCAAGGC CGGGGTCGCG GCGGACTTCG CGGCGGTGCT GCCCAAGCGC ACGAGCGGCG AATTCAAGAC GCGCACCGTG GTGACGAGCG ACCCGCTGGT CGCGCCCGTC AAGGCGGGCG CGCCGCTCGG GCGCGTCGAA CTTGTCGGCG GCGACGGCAA GGTCGTCAAG CAGGCGCCGC TCGTCGCGCT GGAAACGGTC GAGGAGGGTG GCTTCTTCCG CCGGATCTGG GACAGCATCC GGCTGTTCTT CAAGGGGCTG TTCGGCTGA
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Protein sequence | MRVRFPALIS SPVATEPMSL TSRLAAVFLL FVPLAAAAAA AVVPPPPELA AKSWVLMDAA SGSVLVDHRG RERLPPASLT KLMTSHVAAL ELQRGRIKEN DLVTISEKAW RMGGSKMFVR VGNQVAVHDL LRGIIVQSGN DASIALAEHL AGGEDTFAAL MNQEAKRLGL ADTHFVNATG WPAEGHYSSA LDMAKLARAI IIEDPAHYGL YAEKEFVWNG IKQPNRNLLL WRDPSVDGLK TGHTEEAGYC LVASSQRDGQ RMIAAVFGTE SEAARATETA KLLAYGFNFF DSKTFFKKGQ AVQTVEVWKG AARTLKAGVA ADFAAVLPKR TSGEFKTRTV VTSDPLVAPV KAGAPLGRVE LVGGDGKVVK QAPLVALETV EEGGFFRRIW DSIRLFFKGL FG
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