| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0643 |
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| Symbol | |
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| ID | 3672608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 681042 |
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| End bp | 682463 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637709315 |
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| Product | cytochrome c oxidase cbb3-type, subunit I |
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| Protein accession | YP_314401 |
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| Protein GI | 74316661 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
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| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000439174 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.556458 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGCGG CAACCTACAA CTACAAAGTG GTCCGCCAGT TCGCCATCAT GACGGTGGTG
TGGGGGATCG TCGGCATGTT GGTGGGGGTG ATCATCGCCT CGCAACTGAT CTGGCCCGAC
CTGACGTTCG GCATCGAATG GCTTTCCTAC GGGCGTCTGC GGCCGCTGCA TACGAACGCG
GTGATCTTCG CCTTCGGCGG CTCGGCGATG TTCGCCGTGT CCTACTACAT CGTCCAGCGC
ACCTGCCAGG TGCGACTTTG GGCCGAGAAG CTCGCGGCCT TCACGTTCTG GGGCTGGATG
GCGGTGATCG TGCTGGCGGC GATCTCGCTG CCGATGGGCT ACACGAGTTC GAAGGAATAC
GCCGAGCTCG AGTGGCCGAT CGATCTCCTG ATCGCCGCCG TCTGGGTGTC CTACGCGCTG
GTGTTCTTCG GCACCATCGT CAAGCGCAAG ACGAAACATA TCTACGTCTC GAACTGGTTC
TTCGGCGCCT ACATTCTCGT GATCGCGCTG CTGCACATCG TCAACAGCGC CGAGCTGCCG
GTGACCTTGA CCAAGTCCTA CTCGGCCTAC GCCGGCGTAC AGGACGCGAT GGTGCAGTGG
TGGTACGGGC ACAACGCGGT CGGCTTCTTC TTGACCACCG CCTTCCTCGG CATGATGTAC
TACTTCATTC CGAAGCAGGC CGGGCGGCCG ATCTACTCGT ATCGGCTTTC AGTGGTTCAC
TTCTGGTCGC TCAACTTCAT CTACATGTGG GCCGGCCCGC ACCATCTGCA ATACACAGCG
CTGCCCGACT GGGCGCAGTC GCTCGGCATG GTGTTTTCGC TGATGCTGCT CGCGCCGTCG
TGGGGCGGCA TGATGAACGG GATCATGACG CTGTCGGGCG CATGGCACAA ACTGCGCACC
GACCCGATCC TCAAGTTCAT GGTCACTGCG CTGTCGTTCT ACGGCATGTC GACCTTCGAA
GGGCCGATGA TGTCGATCAA GACCGTCAAC GCGCTCTCGC ACTACACCGA ATGGACCGTC
GGCCACGTGC ACTCGGGCGC GCTCGGCTGG GTCGCGATGA TCACGATCGG CTCGATGTAC
TACCTGATCC CGCGGCTCTT CGGCCGTGAT TCGATGGCGA GCATACGGCT GATCGAGTGG
CACTTCTGGC TGTCGACGAT CGGCGTCGTG CTCTACATCG CGTCGATGTG GATCGCCGGT
GTCGCGCAGG GCCTGATGTG GCGCGCGGCG AACGCCGACG GCACGCTGGC GTACAGCTTC
GCCCAGGTCG TCAACACGAT GTATCCCTTC TACGGCATCC GTCTGCTCGG CGGCGCGATG
TTCCTCTCGG GCATGCTGAT GATGGCGTAC AACGTCTGGC AGACCGTCCG CGTCGGCCGC
GTCGTCAACG ACGCCCCGAT CCCGCAAGCC GTCCACGCCT AA
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| Protein sequence | MEAATYNYKV VRQFAIMTVV WGIVGMLVGV IIASQLIWPD LTFGIEWLSY GRLRPLHTNA
VIFAFGGSAM FAVSYYIVQR TCQVRLWAEK LAAFTFWGWM AVIVLAAISL PMGYTSSKEY
AELEWPIDLL IAAVWVSYAL VFFGTIVKRK TKHIYVSNWF FGAYILVIAL LHIVNSAELP
VTLTKSYSAY AGVQDAMVQW WYGHNAVGFF LTTAFLGMMY YFIPKQAGRP IYSYRLSVVH
FWSLNFIYMW AGPHHLQYTA LPDWAQSLGM VFSLMLLAPS WGGMMNGIMT LSGAWHKLRT
DPILKFMVTA LSFYGMSTFE GPMMSIKTVN ALSHYTEWTV GHVHSGALGW VAMITIGSMY
YLIPRLFGRD SMASIRLIEW HFWLSTIGVV LYIASMWIAG VAQGLMWRAA NADGTLAYSF
AQVVNTMYPF YGIRLLGGAM FLSGMLMMAY NVWQTVRVGR VVNDAPIPQA VHA
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