Gene Tbd_0630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0630 
Symbol 
ID3672595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp665633 
End bp668452 
Gene Length2820 bp 
Protein Length939 aa 
Translation table11 
GC content65% 
IMG OID637709302 
Productphosphoenolpyruvate carboxylase 
Protein accessionYP_314388 
Protein GI74316648 
COG category[C] Energy production and conversion 
COG ID[COG2352] Phosphoenolpyruvate carboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0739788 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.189937 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCAC CCCAGAATCT CTTGACCGAC GACGATCTGC GCGCGCAGGT CAAGCTTCTC 
GGCACCCTGC TCGGCCAGGT GCTGCTGCAG TTCGCCGGGG AAGACGTGTT CGAGGCGGTG
GAAACCCTGC GGCGCGGCTT TGCCGACTTG CAGCAGCAGG AAGACCAGCA GCGGCGCAGC
GAACTGATGG CCATGATCGA CGCGATGCCG GCCGGCAAGA TCGAGCTGGT CGTACGCGCG
TTCTCGAGCT ATTTCATGCT GGTCAACGTA GCCGAGGAAA GCTTCGCGCA CCGCAACCGC
CGTCGCATGC TGTCGCACGG CATGACGCTG TGGGAAGGCT CGTTCGACCA CACGCTCGCC
GATCTCAAGG CGCAGGGCCT GTCGGCGGGC ACGCTGCAGG GGCTGATCAA CCGCCTGCAC
TTCGCGCCTG TCTTTACCGC GCATCCGACC GAAGCCCGGC GCCGCGCCGT GATGGAGGCC
ATGCGCAGGA TATTCCTGAT CTGCGACCAG CTCTACAGCC CGAGCCTCGG CGTCAACGAC
CAGCGCGAGC TCGAGGCGCA GCTCGCGGCC GAGATCCAGA TCATGTGGCG CACCGACGAA
CTGCGCAGCG CCAAGCTCGA GGTGCGCGAC GAAGTGCGCA ACGGCCTCTA TTACGTGCGC
GAGAGCCTGT TCGAGGCGGT GCCCAAGGCC TACAGCTTCT TCGAGCGCGC GCTGCGCAAG
CACTACGGCG TGAACGGCGA CGGCGCGGCG CCGATCAGCG TGCCGAGCTT CATCCGCTTC
GGCTCGTGGA TCGGCGGCGA CCGCGACGGC AACCCCTTCG TCACCGCCGA CGTGACCGAA
TGGACCGTGC ATACGCAGAT GCAGGCGGCG CTCGACGAAT ACCGCGCGCG CGTGCGCGAG
TTGCGGCAGA CACTCACCCA CAGTAGCGGC TGGTGCACGC CGTCCGCGCC GTTTCTCGAG
CGCCTGGCCG AATACGAGGC CGAGTTCGGC GAGCAGGTGT TCCGCGGCAC CGCGGTGCAG
ATCTACAGCC GCGAACCTTA CCGCCGCATG GCCGCGATGA TGCTCGCGCG GCTCGACGCG
AATCTCTCGT ACGTGCACCA GTGCCTCGCC GACGTGCCGA GTTTCACCTC GCATCTCGCC
TACGAAGACG CAGCGGCCTT CCTCGCCGAC CTGTATCTGA TCCGCGACTC CCTGATCAGC
CACGGCGACC GCATCATCGC GATGCAGGAC CTGCAGGCAC TGATCCGCCT GGTCGAGAGT
TTCGGCTTTC ACCTGCTGCA GCTCGACATC CGCCAGGAAT CGACGATCCA CACGCGGACC
GTGGCGGCGG TGCTGCAGCA GATCGACCCC GACTTCGACT ACAAAGGCGC CGATGAAGCC
GAGCGTCTGA AGCGCCTGTC GGCGTGGACC GGGCACATCG ATCCGATCGA GATCGATGAC
AGCCTGCTCG ACGACGAGGC GCGCGAGACC GTCGCGGTCT TCCGCCGCAT GGCCAAGCTC
AAGAGCGAAG TCGGCGACGA AGTCTTCGGC ACCTACATCA TTTCGATGAC CCACAGCGCG
TCGCATGTGA TGGAAGTCAT GTTGCTCGCG CGCCTGGTCG GGCTCTGCGG CCACAACGGC
GACGCGTGGT TCTGCCGCAT CCTCGTCGCG CCGCTGTTCG AGACCGTCGA CGACCTGCAG
CGCAGCCAGG CGATCCTCGA CGAGTTGCTG TCGAACAAGG TTTATCGTGC GCTGGTCGCG
GCCGACGGCA ACCGCCAGGA GGTCATGCTC GGCTATTCCG ACTCGTGCAA GGACGGCGGC
ATCCTCGCGT CGAACTGGAA CCTCTATCAG GCGCAGCTTT CGATCATCGC ACTGACCCGG
CGGCATGGCG TCGAGTGCCG GCTGTTCCAT GGCCGCGGCG GTACGGTCGG ACGCGGCGGC
GGCCCGACCC ACGAGGCGAT CCTGTCGCAG CCGCCGGGTA CGGTCAACGG CGAAATCAAG
TTCACCGAGC AGGGCGAAAT GCTGTACTAC AAATACAGCA ACCCCGAGAC GGCGAACTAC
GAAATCGGCA TGGGTGTGAC GGGTCTGCTG AAGGCCAGCG CCACCCTGCT GAAGAAATGC
GAAGTCCGGT ATCCGCAGGA CTATCTCGAC TGGATGCGCG ACATCGCGGC GGCGGGCGAG
ACGACTTATC GCGCGCTGAT CGCGACGCCC GGCTTCATCG ATTACTTCTA CGAAAACACG
CCGGTCACCG AGATCGGCAC GCTCAATATC GGCAGCCGGC CTTCGCATCG CAAGAAGGCC
GACCGCTCGC TCGGCTCGAT CCGCGCGATT CCCTGGGTGT TCGGCTGGGC GCAGTCGCGG
CACACCCTGC CCGCCTGGTA TGGCATCGGC AGCGCGCTCA AGTCCTTCGT CGACCAGCAT
CCGGAGGGGC TTGCGCACCT GCGCGCGATG TACGCCGAGT GGCCATTCTT CCGCGGCCTG
CTGTCGAACG TCCAGATGGC GCTGACCAAG GCCGACATGG AAATCGCCGA GGAATACGCG
CGGTTGTGCG ACCACCCGGG GACGCCCGAC ATCTATCGCG CGATCGCCGA CGAGTTCGCC
CTCACGGTCG CCGGCGTCAA GCAGGTCGCG CAGATCGAAA ACCTGCTCGA GGACAACCAG
CCGCTGGCCC TCTCGATCTC GCGTCGCCGC CCCTACATCG ACCCGATCAA CCACATCCAG
GTCCGGCTAC TCAAGCGCTA TCGTTCCGAG AGCGTGTGGG AATCCGAGCA GGACTCGTGG
CTCACGCCGC TCAAGCGCTC GATCAACGCG ATCGCAGCGG GTATGCGCAA TACGGGCTGA
 
Protein sequence
MNAPQNLLTD DDLRAQVKLL GTLLGQVLLQ FAGEDVFEAV ETLRRGFADL QQQEDQQRRS 
ELMAMIDAMP AGKIELVVRA FSSYFMLVNV AEESFAHRNR RRMLSHGMTL WEGSFDHTLA
DLKAQGLSAG TLQGLINRLH FAPVFTAHPT EARRRAVMEA MRRIFLICDQ LYSPSLGVND
QRELEAQLAA EIQIMWRTDE LRSAKLEVRD EVRNGLYYVR ESLFEAVPKA YSFFERALRK
HYGVNGDGAA PISVPSFIRF GSWIGGDRDG NPFVTADVTE WTVHTQMQAA LDEYRARVRE
LRQTLTHSSG WCTPSAPFLE RLAEYEAEFG EQVFRGTAVQ IYSREPYRRM AAMMLARLDA
NLSYVHQCLA DVPSFTSHLA YEDAAAFLAD LYLIRDSLIS HGDRIIAMQD LQALIRLVES
FGFHLLQLDI RQESTIHTRT VAAVLQQIDP DFDYKGADEA ERLKRLSAWT GHIDPIEIDD
SLLDDEARET VAVFRRMAKL KSEVGDEVFG TYIISMTHSA SHVMEVMLLA RLVGLCGHNG
DAWFCRILVA PLFETVDDLQ RSQAILDELL SNKVYRALVA ADGNRQEVML GYSDSCKDGG
ILASNWNLYQ AQLSIIALTR RHGVECRLFH GRGGTVGRGG GPTHEAILSQ PPGTVNGEIK
FTEQGEMLYY KYSNPETANY EIGMGVTGLL KASATLLKKC EVRYPQDYLD WMRDIAAAGE
TTYRALIATP GFIDYFYENT PVTEIGTLNI GSRPSHRKKA DRSLGSIRAI PWVFGWAQSR
HTLPAWYGIG SALKSFVDQH PEGLAHLRAM YAEWPFFRGL LSNVQMALTK ADMEIAEEYA
RLCDHPGTPD IYRAIADEFA LTVAGVKQVA QIENLLEDNQ PLALSISRRR PYIDPINHIQ
VRLLKRYRSE SVWESEQDSW LTPLKRSINA IAAGMRNTG