Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0630 |
Symbol | |
ID | 3672595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 665633 |
End bp | 668452 |
Gene Length | 2820 bp |
Protein Length | 939 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637709302 |
Product | phosphoenolpyruvate carboxylase |
Protein accession | YP_314388 |
Protein GI | 74316648 |
COG category | [C] Energy production and conversion |
COG ID | [COG2352] Phosphoenolpyruvate carboxylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0739788 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.189937 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCAC CCCAGAATCT CTTGACCGAC GACGATCTGC GCGCGCAGGT CAAGCTTCTC GGCACCCTGC TCGGCCAGGT GCTGCTGCAG TTCGCCGGGG AAGACGTGTT CGAGGCGGTG GAAACCCTGC GGCGCGGCTT TGCCGACTTG CAGCAGCAGG AAGACCAGCA GCGGCGCAGC GAACTGATGG CCATGATCGA CGCGATGCCG GCCGGCAAGA TCGAGCTGGT CGTACGCGCG TTCTCGAGCT ATTTCATGCT GGTCAACGTA GCCGAGGAAA GCTTCGCGCA CCGCAACCGC CGTCGCATGC TGTCGCACGG CATGACGCTG TGGGAAGGCT CGTTCGACCA CACGCTCGCC GATCTCAAGG CGCAGGGCCT GTCGGCGGGC ACGCTGCAGG GGCTGATCAA CCGCCTGCAC TTCGCGCCTG TCTTTACCGC GCATCCGACC GAAGCCCGGC GCCGCGCCGT GATGGAGGCC ATGCGCAGGA TATTCCTGAT CTGCGACCAG CTCTACAGCC CGAGCCTCGG CGTCAACGAC CAGCGCGAGC TCGAGGCGCA GCTCGCGGCC GAGATCCAGA TCATGTGGCG CACCGACGAA CTGCGCAGCG CCAAGCTCGA GGTGCGCGAC GAAGTGCGCA ACGGCCTCTA TTACGTGCGC GAGAGCCTGT TCGAGGCGGT GCCCAAGGCC TACAGCTTCT TCGAGCGCGC GCTGCGCAAG CACTACGGCG TGAACGGCGA CGGCGCGGCG CCGATCAGCG TGCCGAGCTT CATCCGCTTC GGCTCGTGGA TCGGCGGCGA CCGCGACGGC AACCCCTTCG TCACCGCCGA CGTGACCGAA TGGACCGTGC ATACGCAGAT GCAGGCGGCG CTCGACGAAT ACCGCGCGCG CGTGCGCGAG TTGCGGCAGA CACTCACCCA CAGTAGCGGC TGGTGCACGC CGTCCGCGCC GTTTCTCGAG CGCCTGGCCG AATACGAGGC CGAGTTCGGC GAGCAGGTGT TCCGCGGCAC CGCGGTGCAG ATCTACAGCC GCGAACCTTA CCGCCGCATG GCCGCGATGA TGCTCGCGCG GCTCGACGCG AATCTCTCGT ACGTGCACCA GTGCCTCGCC GACGTGCCGA GTTTCACCTC GCATCTCGCC TACGAAGACG CAGCGGCCTT CCTCGCCGAC CTGTATCTGA TCCGCGACTC CCTGATCAGC CACGGCGACC GCATCATCGC GATGCAGGAC CTGCAGGCAC TGATCCGCCT GGTCGAGAGT TTCGGCTTTC ACCTGCTGCA GCTCGACATC CGCCAGGAAT CGACGATCCA CACGCGGACC GTGGCGGCGG TGCTGCAGCA GATCGACCCC GACTTCGACT ACAAAGGCGC CGATGAAGCC GAGCGTCTGA AGCGCCTGTC GGCGTGGACC GGGCACATCG ATCCGATCGA GATCGATGAC AGCCTGCTCG ACGACGAGGC GCGCGAGACC GTCGCGGTCT TCCGCCGCAT GGCCAAGCTC AAGAGCGAAG TCGGCGACGA AGTCTTCGGC ACCTACATCA TTTCGATGAC CCACAGCGCG TCGCATGTGA TGGAAGTCAT GTTGCTCGCG CGCCTGGTCG GGCTCTGCGG CCACAACGGC GACGCGTGGT TCTGCCGCAT CCTCGTCGCG CCGCTGTTCG AGACCGTCGA CGACCTGCAG CGCAGCCAGG CGATCCTCGA CGAGTTGCTG TCGAACAAGG TTTATCGTGC GCTGGTCGCG GCCGACGGCA ACCGCCAGGA GGTCATGCTC GGCTATTCCG ACTCGTGCAA GGACGGCGGC ATCCTCGCGT CGAACTGGAA CCTCTATCAG GCGCAGCTTT CGATCATCGC ACTGACCCGG CGGCATGGCG TCGAGTGCCG GCTGTTCCAT GGCCGCGGCG GTACGGTCGG ACGCGGCGGC GGCCCGACCC ACGAGGCGAT CCTGTCGCAG CCGCCGGGTA CGGTCAACGG CGAAATCAAG TTCACCGAGC AGGGCGAAAT GCTGTACTAC AAATACAGCA ACCCCGAGAC GGCGAACTAC GAAATCGGCA TGGGTGTGAC GGGTCTGCTG AAGGCCAGCG CCACCCTGCT GAAGAAATGC GAAGTCCGGT ATCCGCAGGA CTATCTCGAC TGGATGCGCG ACATCGCGGC GGCGGGCGAG ACGACTTATC GCGCGCTGAT CGCGACGCCC GGCTTCATCG ATTACTTCTA CGAAAACACG CCGGTCACCG AGATCGGCAC GCTCAATATC GGCAGCCGGC CTTCGCATCG CAAGAAGGCC GACCGCTCGC TCGGCTCGAT CCGCGCGATT CCCTGGGTGT TCGGCTGGGC GCAGTCGCGG CACACCCTGC CCGCCTGGTA TGGCATCGGC AGCGCGCTCA AGTCCTTCGT CGACCAGCAT CCGGAGGGGC TTGCGCACCT GCGCGCGATG TACGCCGAGT GGCCATTCTT CCGCGGCCTG CTGTCGAACG TCCAGATGGC GCTGACCAAG GCCGACATGG AAATCGCCGA GGAATACGCG CGGTTGTGCG ACCACCCGGG GACGCCCGAC ATCTATCGCG CGATCGCCGA CGAGTTCGCC CTCACGGTCG CCGGCGTCAA GCAGGTCGCG CAGATCGAAA ACCTGCTCGA GGACAACCAG CCGCTGGCCC TCTCGATCTC GCGTCGCCGC CCCTACATCG ACCCGATCAA CCACATCCAG GTCCGGCTAC TCAAGCGCTA TCGTTCCGAG AGCGTGTGGG AATCCGAGCA GGACTCGTGG CTCACGCCGC TCAAGCGCTC GATCAACGCG ATCGCAGCGG GTATGCGCAA TACGGGCTGA
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Protein sequence | MNAPQNLLTD DDLRAQVKLL GTLLGQVLLQ FAGEDVFEAV ETLRRGFADL QQQEDQQRRS ELMAMIDAMP AGKIELVVRA FSSYFMLVNV AEESFAHRNR RRMLSHGMTL WEGSFDHTLA DLKAQGLSAG TLQGLINRLH FAPVFTAHPT EARRRAVMEA MRRIFLICDQ LYSPSLGVND QRELEAQLAA EIQIMWRTDE LRSAKLEVRD EVRNGLYYVR ESLFEAVPKA YSFFERALRK HYGVNGDGAA PISVPSFIRF GSWIGGDRDG NPFVTADVTE WTVHTQMQAA LDEYRARVRE LRQTLTHSSG WCTPSAPFLE RLAEYEAEFG EQVFRGTAVQ IYSREPYRRM AAMMLARLDA NLSYVHQCLA DVPSFTSHLA YEDAAAFLAD LYLIRDSLIS HGDRIIAMQD LQALIRLVES FGFHLLQLDI RQESTIHTRT VAAVLQQIDP DFDYKGADEA ERLKRLSAWT GHIDPIEIDD SLLDDEARET VAVFRRMAKL KSEVGDEVFG TYIISMTHSA SHVMEVMLLA RLVGLCGHNG DAWFCRILVA PLFETVDDLQ RSQAILDELL SNKVYRALVA ADGNRQEVML GYSDSCKDGG ILASNWNLYQ AQLSIIALTR RHGVECRLFH GRGGTVGRGG GPTHEAILSQ PPGTVNGEIK FTEQGEMLYY KYSNPETANY EIGMGVTGLL KASATLLKKC EVRYPQDYLD WMRDIAAAGE TTYRALIATP GFIDYFYENT PVTEIGTLNI GSRPSHRKKA DRSLGSIRAI PWVFGWAQSR HTLPAWYGIG SALKSFVDQH PEGLAHLRAM YAEWPFFRGL LSNVQMALTK ADMEIAEEYA RLCDHPGTPD IYRAIADEFA LTVAGVKQVA QIENLLEDNQ PLALSISRRR PYIDPINHIQ VRLLKRYRSE SVWESEQDSW LTPLKRSINA IAAGMRNTG
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