Gene Tbd_0606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0606 
Symbol 
ID3673716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp633790 
End bp634755 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content69% 
IMG OID637709277 
ProductATP phosphoribosyltransferase regulatory subunit 
Protein accessionYP_314364 
Protein GI74316624 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3705] ATP phosphoribosyltransferase involved in histidine biosynthesis 
TIGRFAM ID[TIGR00443] ATP phosphoribosyltransferase, regulatory subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.400178 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCCT GGTTGCTGCC CGAAAACGTC GAGGATGTGC TGCCGCCACA GGCCTGGCGC 
CTCGAAGCGA TGCGGCGCGC GCTGCTCGAC CTGTTCCGCG AGCGCGGCTA TCAGCTCGTG
ATCCCGCCGC TCATCGAGTA CGTCGAGTCG CTGCTGACCG GCGTCGGCGC CGATCTCGAC
CTCAAGACGT TCAAGCTGGT CGATCAGCTC TCCGGCCGTC TCATGGCGGT GCGTGCCGAC
ATCACGCCTC AGGTCGCGCG CATTGATGCC CACCTGCTAG GTGCCAACGC GATCAACCGC
CTGTGTTACA CCGGCAGCGT CCTGCACACC CAGTCCGACG GCTTTCACCG TTCGCGCGAA
CCGATCCAGA TCGGCGCCGA GGTCTACGGC GACGCCGGCA TCGAAGCCGA CCTCGAAATC
CTCAGCCTGA TGCTGCAGGG GCTGGCGGCG TGCGGGGTCG AGGGCGTACA ACTCGACGTC
GGGCACGTCG GCGTCTACCG CGCGCTGGCG CAGGAAGCCG GGTTCGACAA CGCGACCGAG
CACGAGCTGT TCTGCGCGCT GCAGGCGAAG GACGCGAGTG CGGTCGACGT GCTCACGGCA
GGTCTGCCGA TGGCGCTGCG CGACGCGTTC GCGGCGCTGC CGCAGCTGTA TGGCGGCCGT
GAGGTGCTGG CCGAGGCGCG TGCCCGCTTG CCGCACCTCC CGGCCGTCGC CGCGGCGCTC
GATACGCTGG TGTCGCTCGA CCAGGCGCTC GGCGGTGTCG AACTCGCCTA CGACCTTGCC
GAGCTGCGCG GCTACGGCTA CCACAGCGGC GTGGTGTTCG CGGCCTATAC CCGCGGACGC
AGCCATGCCA TCGCACAGGG TGGGCGCTAC GACGAGGTCG GCCGCGTGTT CGGACGGGCG
CGTCCGGCGA CCGGCTTCAG TATGGATTTA CGCGAGCTGG TCGTTGCCGG CTCGGCTTCA
GAATAA
 
Protein sequence
MTAWLLPENV EDVLPPQAWR LEAMRRALLD LFRERGYQLV IPPLIEYVES LLTGVGADLD 
LKTFKLVDQL SGRLMAVRAD ITPQVARIDA HLLGANAINR LCYTGSVLHT QSDGFHRSRE
PIQIGAEVYG DAGIEADLEI LSLMLQGLAA CGVEGVQLDV GHVGVYRALA QEAGFDNATE
HELFCALQAK DASAVDVLTA GLPMALRDAF AALPQLYGGR EVLAEARARL PHLPAVAAAL
DTLVSLDQAL GGVELAYDLA ELRGYGYHSG VVFAAYTRGR SHAIAQGGRY DEVGRVFGRA
RPATGFSMDL RELVVAGSAS E