| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0538 |
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| Symbol | |
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| ID | 3673789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 561750 |
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| End bp | 562736 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637709209 |
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| Product | capsule expression protein KpsF/GutQ |
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| Protein accession | YP_314296 |
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| Protein GI | 74316556 |
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| COG category | [K] Transcription
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
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| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGTCC AATCCCTCTC CGCCGAACAT TCACTCGCGC TCGCGCGTCA GGTCCTCGAG
ATCGAAGCCG ACGCGCTGCA TACCGTTTCG ACACGTCTCG ATCACGGATT TGCCGACGCC
GTTCGCCTGA TCCTCGCCTG CACCGGGCGG GTCGTCGTCT CCGGGATGGG CAAATCGGGG
CACGTCGGTA GCAAGATCGC CGCCACCCTC GCGTCGACCG GAACGCCGGC ATTTTTCATG
CATCCCGGGG AAGCGAGCCA CGGCGACCTC GGCATGATCG CGCACGACGA CGTCGTACTC
GCGCTGTCCA ATTCCGGCGA AAGCAGCGAG ATCGTCTGCA TCGTGCCGCT CATCAAGCGA
CGCGGCGCGA AGCTCGTCGC GATGACCGGC AACCCGGCGT CGACGCTCGC GCGCGAGGCC
GATGCCCACC TCAACGCCAA GGTCGACAAG GAGGCGTGTC CGCTCAACCT CGCGCCGACC
GCGAGCACGA CGGCGGCACT CGCGCTCGGA GACGCGCTCG CGGTCGCCCT GCTCGACGCA
CGCGGTTTTT CGGCCGACGA TTTCGCGCGC ACCCACCCGG GCGGCAGCCT CGGGCGGCGG
CTGCTCGTTC ATGTCGCCGA CGTCATGCAC GGCGGCGACG CGCTGCCGAA AGTCGGGCGC
GACGCGACGC TCAAGGCCGC GCTGTTCGAA ATGACCAAAA AGGGCCTGGG CATGACCGCC
GTGGTCGATG CCGACGACCG CGTCGTCGGG CTCTTCACCG ACGGCGACCT GCGTCGGACG
CTCGAACATG CTCTCGACAT CCAGCACGCG AAAATCGCCG ACCTCATGAC ACCGAACCCG
AAGACGATCC GCGCGGACGA ACTCGCCGCC GCGGCAGTGG AGAAAATGGA GACGCTGAAA
ATCAACGGTC TGCTCGTCGT CGACGCCGAC AATCGCCTGG TCGGCGCCCT CAACATGCAC
GACCTGCTGA AAGCGGGGGT GGTGTGA
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| Protein sequence | MQVQSLSAEH SLALARQVLE IEADALHTVS TRLDHGFADA VRLILACTGR VVVSGMGKSG
HVGSKIAATL ASTGTPAFFM HPGEASHGDL GMIAHDDVVL ALSNSGESSE IVCIVPLIKR
RGAKLVAMTG NPASTLAREA DAHLNAKVDK EACPLNLAPT ASTTAALALG DALAVALLDA
RGFSADDFAR THPGGSLGRR LLVHVADVMH GGDALPKVGR DATLKAALFE MTKKGLGMTA
VVDADDRVVG LFTDGDLRRT LEHALDIQHA KIADLMTPNP KTIRADELAA AAVEKMETLK
INGLLVVDAD NRLVGALNMH DLLKAGVV
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