Gene Tbd_0509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0509 
Symbol 
ID3673142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp535619 
End bp536023 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content71% 
IMG OID637709180 
ProductRNA-binding S4 protein 
Protein accessionYP_314267 
Protein GI74316527 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1188] Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.916368 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.173554 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGGCG ACACGACTGC AGCAAGCGAG CGCATGCGGC TCGACAAATG GCTATGGGCG 
GCGCGCTTCT TCAAGACGCG GAGCCTCGCG GTGCAGGCCA TTGCGCATGG CCGGGTGCGG
CTCGACGGCG AGCGGGTCAA GCCGGCGCGC GAAGTGAAGT GCGGCGACCG GCTCGATATC
CAGATCGAGG TGCTCGAGTG GTCGGTGACC GTGCGCGGCC TGAGCAAGCA ACGCGGTCCC
GCGGCCGTCG CGCAGATGCT CTACGAGGAA GACCCGTCGA GCATCGCGCG CCGCGCCGAG
CGCCGGCAGC AGCACGCGCT CGCGCCGAAT CCCGCCGCCG CGATCAAGGG CCGGCCGACT
AAGCGCGACC GCCGCCACAT CCACCGCTTC ACCGGCGGTT CCTGA
 
Protein sequence
MTGDTTAASE RMRLDKWLWA ARFFKTRSLA VQAIAHGRVR LDGERVKPAR EVKCGDRLDI 
QIEVLEWSVT VRGLSKQRGP AAVAQMLYEE DPSSIARRAE RRQQHALAPN PAAAIKGRPT
KRDRRHIHRF TGGS