Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0500 |
Symbol | |
ID | 3673133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 520273 |
End bp | 522009 |
Gene Length | 1737 bp |
Protein Length | 578 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637709171 |
Product | sodium/hydrogen exchanger family protein |
Protein accession | YP_314258 |
Protein GI | 74316518 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3263] NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.76767 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTCA TCAACCAGCT CGTACTCGCG GGCGCGGTCC TGCTGCTCGT GGCCGTGCTC GCAAGCGCAC TCTCCTACCG CATCGGCATG CCGCTGCTGC TGGTGTTTCT CGCCGTCGGC ATGCTGGCGG GCGAGGACGG CCCGGGCGGA ATCGTATTCA ACCACAGCGG CTTCGCCTAC ATGGCCGGCA GCGTCGCGCT TGCCGTCATC CTGCTCGACG GCGGACTCAA TACGCGGGCG GAAAGTTTCA GGGGCAGCCT GCGCCCGGCC GCGACGCTCG CGACCGCCGG CGTCGTGATC ACCTGCGTGG TCACCGGGTT CTTCGCCGCC TGGGTGCTCG ACTTCAGCTA TCTGCAAGGC ATGCTCGTCG GCGCGGTGGT CGGATCGACC GACGCCGCCG CGGTATTCGC GCTGTTGCGC GCCAAGGGCC TCACGCTCAA GGAGCGCCTG GCGGCGACGC TCGAAATCGA ATCCGGCAGC AACGATCCGA TGGCAGCCCT GCTCACGCTC GCCTTCATCG CCTTGATCAC CGCGGGACGC TCGACCCCGG GCTGGGAAAC GCTCGCACTG CTGATTCAGC AGTTGGGCCT TGGCCTGATC GCCGGGCTCG GCGGCGGGGC ACTGCTCGTC TGGTTGACCA ACCGGCTGCG GCTCGAACGC GGCATGTATC CGATGATGAT TCTGGCCGGC GGGCTGCTGT CCTACAGTCT TACGACGGTA CTCGGCGGAA GCGGCTTTCT TGCGATCTAC TTGTGCGGCG TCGTCGTCAG CAACCGCAAT CCGCGGGAGG CGAGCAACAT CCTGCAGGTG CACGATGGCC TGGCATGGCT CGCGCAGATA GGCATGTTCC TGATGCTCGG GTTACTGGCG TCGCCGCACG AGCTCGTCGA CAACGCCGCG GCGGGGCTGG CTATCGCGCT GGTGCTGATG CTGGTCGCAC GACCCGTGGC GGTCGGGCTT TGCCTGCTGC CCTTCCGTTT TTCCGGGCGC GAGCAGATTT TCATCGCCTG GGTCGGCCTG CGCGGCGCCG TGCCCATCGT TCTTGCCTTG TTTCCGCTGC TCGCCGGCAT CCCGGAGGCG TCGCTGATTC TCGATGTCGC CTTCTTCGTC GTGCTGATTT CGCTGACCGT ACAGGGCTGG ACGATCCCCT TGTTCGCACG CTTGCTGCAG CTCGAGGTGC CGCCCGCCCC CGAGCCGAAC GAACGACACG ACCTGGAAGC GAGCGCGGAG AGCGGGCACG CTTTCCTCGG GTTCAAGCTG CCGCCCAATT CCACGCTCAT TGGCCAGCCT GCCAATGCCC TCTGGCTTCC CGGCGCTGCC CGCCCGGTCG CGATCGCGCG CGGAAACGAG ACGCTGACGC CCGAGATCGC CGGCAGGCTG CTTCCCGGCG ACACCCTGTA CCTGCTCGCG CCGAGCGCCG ACTGCGACAC ACTGAGCGAG CTCCTGGTCG CGCCGGTCGC GCCGCCCCAC CTCGAGCGAC GCCATTTCTA CGGGGTCTTC GTTCTGCATG GCGACGCGTC GATGGCAGCC GTAGCCGGCC AGTACGACCT GCCCTTGCCC GCGGGGGCGG CAGAGCTGAC GCTCGCGCAA TTCCTCACGC GGACGCTGCG CCGTCATCCA GGCCCGGGCG ACCGCGTGCG CCTCGGCAAA CTCGAGTTCG TCGTGCGCAC CGTCGTCAAA GGCCGTATCA CCCGGGTCGG TCTACGCATC CCGACGCAAC TCGATCGCAA GCGCTGA
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Protein sequence | MELINQLVLA GAVLLLVAVL ASALSYRIGM PLLLVFLAVG MLAGEDGPGG IVFNHSGFAY MAGSVALAVI LLDGGLNTRA ESFRGSLRPA ATLATAGVVI TCVVTGFFAA WVLDFSYLQG MLVGAVVGST DAAAVFALLR AKGLTLKERL AATLEIESGS NDPMAALLTL AFIALITAGR STPGWETLAL LIQQLGLGLI AGLGGGALLV WLTNRLRLER GMYPMMILAG GLLSYSLTTV LGGSGFLAIY LCGVVVSNRN PREASNILQV HDGLAWLAQI GMFLMLGLLA SPHELVDNAA AGLAIALVLM LVARPVAVGL CLLPFRFSGR EQIFIAWVGL RGAVPIVLAL FPLLAGIPEA SLILDVAFFV VLISLTVQGW TIPLFARLLQ LEVPPAPEPN ERHDLEASAE SGHAFLGFKL PPNSTLIGQP ANALWLPGAA RPVAIARGNE TLTPEIAGRL LPGDTLYLLA PSADCDTLSE LLVAPVAPPH LERRHFYGVF VLHGDASMAA VAGQYDLPLP AGAAELTLAQ FLTRTLRRHP GPGDRVRLGK LEFVVRTVVK GRITRVGLRI PTQLDRKR
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