Gene Tbd_0480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0480 
Symbol 
ID3673113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp502315 
End bp503097 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content64% 
IMG OID637709151 
Productdienelactone hydrolase family protein 
Protein accessionYP_314238 
Protein GI74316498 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTG CCCTTGCGTT GTCGCTGTTG ATGTTCACGT CTTCCGCCCT CGCTGCCGTG 
ATCGGCAAGG ACATCAGCTA CAAGGCCGGC GATACCGTGA TGAAGGGATT TCTCGCCTAT
GACGACGCAG TCGCGGGCAA GCGTGCGGGC GTGCTCGTGG TGCCGGAATG GTGGGGCGCG
AACGACTACC CGAGAAAGCG TGCGCGCATG CTCGCCGAGG CGGGCTACGT CGCACTCGTC
GTCGACATGT ACGGCGAGGG CCAGGTCACC GACAATCCCA AGGATGCGGG CGCGCTCGCG
GGTAACGTGA ACAAGAATCC GCAGCTGGCC TACGCGCGCG TCGACGCCGC GCGCGAATTT
CTCGACCGGC AGCCGCACGT CAAGAAAGGT GAAACCGCTG CCCTCGGCTA CTGCTTCGGC
GGCGGCGTCG TGCTCAACGT CGTGCGCGCG GGCATGCCGC TCAAGTCGGC CGTGAGCTAC
CACGGCGTGC TCGCGACCGA CATCGCGGTG AAGCCGGGTG ACATCGAGGC GAAGCTGCGT
GTCTTCCATG GCGAAGCCGA TCCGATCGTT CCGCCCGAGC AGGTCGAGGC GTTCAAGACC
GAGATGGACA ACGCCAAGGC CGACTACATG TTCGTCTCCT ATCCCGGCGT CAAGCACACC
TTCACCAACC GCGAGGCCGA CAGCTATGCC GCCCAGTTCG GCCTGCCGCT CAAGTACGAC
AACGCGGCGG ACAAGGACTC GTGGATACGC ACGCTCGAAT TCCTCAAGGT GACCCTGCAC
TGA
 
Protein sequence
MKTALALSLL MFTSSALAAV IGKDISYKAG DTVMKGFLAY DDAVAGKRAG VLVVPEWWGA 
NDYPRKRARM LAEAGYVALV VDMYGEGQVT DNPKDAGALA GNVNKNPQLA YARVDAAREF
LDRQPHVKKG ETAALGYCFG GGVVLNVVRA GMPLKSAVSY HGVLATDIAV KPGDIEAKLR
VFHGEADPIV PPEQVEAFKT EMDNAKADYM FVSYPGVKHT FTNREADSYA AQFGLPLKYD
NAADKDSWIR TLEFLKVTLH