Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0471 |
Symbol | |
ID | 3673104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 493680 |
End bp | 495896 |
Gene Length | 2217 bp |
Protein Length | 738 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637709142 |
Product | metal dependent phosphohydrolase, HD region |
Protein accession | YP_314229 |
Protein GI | 74316489 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAATCCT CAACCGGGGC CGCGCCTGAA AACTCGCGCA CCCGCAAGCC GGCGCCCGCC CCGCGTGCGC CGGCAATGAC GCACGGCTTC GACACACTGC GCGAGCATCT GGCCCACCTC GGGCCGGAAG ATGTCGCTCA GCTCGAACAG GCCTACGAAT TCAGCCGCAG CGCCCATGAA GGGCAGTTTC GCAAGAGCGG CGAACCCTAT ATCTCCCATC CGCTCGCCGT CGCCGCGATC CTCGCGGACT GGCATCTCGA CGCCCAGACC CTCTGCGCCG CCCTGCTGCA CGACGTCGTC GAGGACACGC CGGCGACGGC CGGCGAGATC GAAGCCCGCT TCGGCAAGGC CGTCGCGGTG CTGGTCGGCG GCGTCTCCAA GCTCGACAAG CTCGCCTTCG AATCCGAGCA GCACGCGCAG GCGGAAAACT TCCGCAAGAT GCTGCTGGCG ATGGCGCAGG ACGTCCGCGT GATCCTGGTC AAGCTCGCCG ATCGCCTGCA CAACATGCAC ACGATGGGCG CGATGCCCGC CGAAAAGCGC CGCCGCATCG CGACCGAAAC GCTGGAGATC TACGCGCCGA TCGCCAACCG GCTCGGCCTG CACTCGGTCT ACCAGGAACT CGAGGATCTC GGCTTCCGCT ACAGCCATCC CAACCGCTAC CAGGTGCTCG CCAAGGCGGT GAAGGCCGCG CGGGGCAACC GTCGCGAGCT GGTCGAACGG GTCAAGGTCG CGCTGCAGGA AAAGCTCGAG CAATGCAAGA TCGAGGCCGC GATCAGCGGC CGCGAAAAGC ACCTCTACAG CATCTACCGC AAGATGCAGG AGAAAAACCT CGCGTTTTCC GAGGTCTTCG ACATCTACGG CTTTCGCGTC GTCGTGCGGG ACCAGCCCGC CTGCTACCTC GCGCTCGGCG CGCTGCATGC GCTCTACAAG CCGATTCCGG GCAAGTTCAA GGACTACATC GCGATCCCCA AGGCCAACGG CTACCAGTCG CTGCATTCGA TCCTGTTCGG CCCCAACGGC ACGCCGATCG AAGTCCAGAT CCGCACCGTC GACATGAACC GTCTCGCCGA GTCCGGCGTC GCGTCGCACT GGATGTACAA ATCGGCCGAC ACCGCGCTGA ACGACGTGCA GACGCGCACC CACCGCTGGC TGCAGTCGCT GCTCGACATC CAGGCCGACC ACGGCGACTC GCCCGAATTC CTCGAACATA TCAAAGTCGA CCTCTTCCCC GACGAGGTCT ACGTGTTCAC GCCGAAGGGC AAGATCATGG CCTTGCCGCG CGGGGCGACC GCGGTCGACT TCGCCTTCGC CGTGCACAGC GACGTCGGCC ACCGCTGCAT CGCGGTCAAG ATCAACTACG AGCTGATGCC GCTGCGCACG CAGCTCAGGA ACGGCGATCA CGTCGAGGTG CTGACCGCGT CGAACGCGAG CCCCAACGCC GCCTGGCTCA ACTTCGTCGT CACCGGCAAG GCGCGCTCGC ACATCCGCAA CTACCTGCGC AACACGCGGG TCGAGGAAGC CGCGGCGCTC GGCGAACGCC TGCTCAGGAA CGCGATCGAG GCGCTGCATC CGGGCGCCGA AGCCGACCCC ACGGTGTGGG ATCGCGTCGT CAAGGACTAC GGCCTGCAGA CCCGCGACGA ACTCTTCGCC GGGATCGGCC TCGGCCGCAA GCTGCCGCTC GTCGTCGCCC ACCAGCTGCT GCACGTTCAG GGCGAGAAGA CCGGCGAGCC CGCGCATCCG CACGCGATCA GCATCCGCGG CACCGAAGGC ATCGCGGTCG AACTGGCGCA GTGCTGCCAT CCGATTCCGG GTGACCCGAT TCTCGGCTTC ATCCACAAGG ACCGCGGCCT CATCATCCAC ACCCACGACT GCCCGTCGAT CCGCGCCTTC CGCACCGATC CCGAGAAATG GCTCGACGTC GAATGGGAGG CCGAGCCGGG CCGCATGTTC GACGTCTCGA TCAAGGTCGT CGTCGGCAAC AAGCGCGGCG TTCTGGCCAA GGTCGCCGCC TCGATCGCCG AACACGGCTC GAACATCGGC AACGTGTCGA TGGAGGAAGA GGACGGCAGC CCGTACACCG TGCTGTTCTT CACGGTCCAG GTCGAAAATC GCGCCCACCT CGCGCGCGTC ATGCGCGGCC TGCGCATGCT GCCCGACGTC GTCCGGATCT TCCGCATCAA GGGCAAGAAA GACGGCCGCG CGGCCCCCCT CCAATAA
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Protein sequence | MKSSTGAAPE NSRTRKPAPA PRAPAMTHGF DTLREHLAHL GPEDVAQLEQ AYEFSRSAHE GQFRKSGEPY ISHPLAVAAI LADWHLDAQT LCAALLHDVV EDTPATAGEI EARFGKAVAV LVGGVSKLDK LAFESEQHAQ AENFRKMLLA MAQDVRVILV KLADRLHNMH TMGAMPAEKR RRIATETLEI YAPIANRLGL HSVYQELEDL GFRYSHPNRY QVLAKAVKAA RGNRRELVER VKVALQEKLE QCKIEAAISG REKHLYSIYR KMQEKNLAFS EVFDIYGFRV VVRDQPACYL ALGALHALYK PIPGKFKDYI AIPKANGYQS LHSILFGPNG TPIEVQIRTV DMNRLAESGV ASHWMYKSAD TALNDVQTRT HRWLQSLLDI QADHGDSPEF LEHIKVDLFP DEVYVFTPKG KIMALPRGAT AVDFAFAVHS DVGHRCIAVK INYELMPLRT QLRNGDHVEV LTASNASPNA AWLNFVVTGK ARSHIRNYLR NTRVEEAAAL GERLLRNAIE ALHPGAEADP TVWDRVVKDY GLQTRDELFA GIGLGRKLPL VVAHQLLHVQ GEKTGEPAHP HAISIRGTEG IAVELAQCCH PIPGDPILGF IHKDRGLIIH THDCPSIRAF RTDPEKWLDV EWEAEPGRMF DVSIKVVVGN KRGVLAKVAA SIAEHGSNIG NVSMEEEDGS PYTVLFFTVQ VENRAHLARV MRGLRMLPDV VRIFRIKGKK DGRAAPLQ
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