| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0430 |
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| Symbol | |
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| ID | 3671697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 449718 |
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| End bp | 450698 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637709096 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_314188 |
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| Protein GI | 74316448 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.247417 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAGCG CCACGGAATT TCTCAAGCCG CGTATCGTGG AGGTCGACCG TGCCTCCCCT
CTGCACGCCA AGGTCATCAT GGAGCCTTTC GAGCGCGGCT ATGGCCATAC GCTCGGCAAC
GCGCTGCGTC GCATCTTGTT GTCTTCCATG GTGGGTTATG CGCCGACCGA GGTCGCGATC
AGCGGCGTCG TTCACGAATA TTCGACGATC GAGGGCGTGC AGGAGGATGT CGTCGACATC
CTGCTGAATC TCAAGGGCAT CGCGTTCAAG ATGCATGGCA AGGCGGAAGC GATCCTCAAG
GTCTCCAAGA GTGGCGAAGG CGTCGTCACC GCGGGTGACA TCGAGGTTGG CCACGACATC
GAGGTGTTGA ACCCGGACCA CGTCATCGCG CACCTGACCA AGGGCGGCAA GCTCGACATG
GAAATCAAGA TCGAGGCTGG CCGCGGCTAT CAGCCGGCGA CCGCGCGCAA GGTGTCGGAA
GAGACGCGCG CTGTCGGCTC GATTCTGGTC GACGCCTCGT TCAGCCCGGT GCGCCGCGTC
GCCTATGCCG TCGAAAGCGC ACGCGTCGAG CAGCGTACCG ACCTCGACCG TCTCGTAATC
GACATCGAAA CCAACGGCGT CGTCGAGCCG GAGGAAGCGG TGCGCACGGC CGCGCGTATT
CTGGTGAGCC AGCTGTCCGT GTTCGCCGAC CTCGAGGGCA CGCCGGCCGA GTCCGAGTCG
CCGCGTTCGC CGCAGGTCGA CCCGCTGCTG CTCCGCCCGG TCGACGATCT CGAACTGACC
GTGCGTTCGG CCAACTGTCT GAAGGCCGAG AACATCTATT TCATCGGCGA CCTGATCCAG
CGTTCCGAAA CCGAGCTCCT GCGCACGCCC AACCTCGGCC GCAAGTCGCT CAACGAGATC
AAGGATGTGC TCGCGTCGAA GGGTCTGTCG CTCGGCATGA AGCTCGAAAA CTGGCCGCCG
GCGGGGCTCG AGCGTCCCTG A
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| Protein sequence | MQSATEFLKP RIVEVDRASP LHAKVIMEPF ERGYGHTLGN ALRRILLSSM VGYAPTEVAI
SGVVHEYSTI EGVQEDVVDI LLNLKGIAFK MHGKAEAILK VSKSGEGVVT AGDIEVGHDI
EVLNPDHVIA HLTKGGKLDM EIKIEAGRGY QPATARKVSE ETRAVGSILV DASFSPVRRV
AYAVESARVE QRTDLDRLVI DIETNGVVEP EEAVRTAARI LVSQLSVFAD LEGTPAESES
PRSPQVDPLL LRPVDDLELT VRSANCLKAE NIYFIGDLIQ RSETELLRTP NLGRKSLNEI
KDVLASKGLS LGMKLENWPP AGLERP
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