| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0427 |
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| Symbol | rpsM |
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| ID | 3671694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 448272 |
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| End bp | 448628 |
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| Gene Length | 357 bp |
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| Protein Length | 118 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637709093 |
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| Product | 30S ribosomal protein S13 |
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| Protein accession | YP_314185 |
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| Protein GI | 74316445 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.405305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.137933 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTCGTA TTGCTGGGGT TAATATCCCG AATCACCAAC ACGCGGTTAT TGCACTGACC
GCCATTTACG GCATCGGCCG GACGACCTCC GGCAAGATCT GCGAGGCGGC GGGCATTGCC
CAGACGTCGA AGATCAAAGA CCTCTCCGAG GCCGAAATGG AGCGCCTGCG CGAAGGGGTG
TCGAAATTCA CGGTCGAGGG CGACCTGCGC CGTGAAGTCA CGATGAACAT CAAGCGTCTG
ATGGACCTGG GCTGCTACCG CGGCTTCCGT CACCGCAAAG GTCTGCCGGT GCGCGGCCAG
CGCACCCGCA CCAACGCGCG CACTCGCAAG GGTCCGCGCA AGGCCATCAA AAAGTAA
|
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| Protein sequence | MARIAGVNIP NHQHAVIALT AIYGIGRTTS GKICEAAGIA QTSKIKDLSE AEMERLREGV
SKFTVEGDLR REVTMNIKRL MDLGCYRGFR HRKGLPVRGQ RTRTNARTRK GPRKAIKK
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