| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0411 |
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| Symbol | rpsC |
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| ID | 3671678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 440695 |
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| End bp | 441399 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637709077 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_314169 |
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| Protein GI | 74316429 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000407392 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.239149 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACAAA AAATACATCC GATTGGATTC CGCCTCGGTG TTCAGCGCAT CTGGACGGCC
AAGTGGTATG GCTCGAACCG TAATTTCTCC GACACGCTGC TCGAAGACAT CAAGGTTCGC
GATTACCTGA AGAAGAAGCT CTCGCACGCC TCGGTCTCGA AGGTGCTCAT CGAGCGTCCG
GCGAAGAACG CGCGGATCAC AATCTTCAGT GGTCGCCCCG GTGTCGTGAT CGGCAAGAAG
GGTGAGGACA TCGAGGTGCT GCGCGGCGAA CTCGCGCGAC TGATGTCGGT GCCGGTGCAC
GTCAACATCG AAGAAGTGCG CAAGCCCGAG ACCGATGCGC AGATCGTCGC CGACGGCATC
GCCCAGCAGC TCGAGAAGCG TGTCATGTTC CGCCGTGCCA TGAAGCGCGC GATGCAAAAC
GCGATGCGCC TCGGCGCCCA GGGCATCAAG ATCATGAGCT CGGGTCGTCT GAACGGCGCC
GAGATCGCGC GTACCGAGTG GTACCGTGAA GGCCGCGTGC CGCTCCATAC CCTGCGTGCC
GAAATCGACT ACGGTTTCGC GGAAGCCAAG ACCACCTACG GGATCATCGG GATCAAGGTT
TGGGTATACA AAGGCGATGC ATTGACCCGC GGTGAGCAGC CTGCAGCTGC CGAACAGGAA
AAGCGCGGCA AGAAATCAGG AGTGAAACAT GCTGCAGCCA GCTAG
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| Protein sequence | MGQKIHPIGF RLGVQRIWTA KWYGSNRNFS DTLLEDIKVR DYLKKKLSHA SVSKVLIERP
AKNARITIFS GRPGVVIGKK GEDIEVLRGE LARLMSVPVH VNIEEVRKPE TDAQIVADGI
AQQLEKRVMF RRAMKRAMQN AMRLGAQGIK IMSSGRLNGA EIARTEWYRE GRVPLHTLRA
EIDYGFAEAK TTYGIIGIKV WVYKGDALTR GEQPAAAEQE KRGKKSGVKH AAAS
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