| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0404 |
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| Symbol | rpsJ |
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| ID | 3671671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 437212 |
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| End bp | 437520 |
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| Gene Length | 309 bp |
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| Protein Length | 102 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637709070 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_314162 |
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| Protein GI | 74316422 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000016581 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.139805 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAAACC AGAAAATCCG CATCCGCCTG AAGGCGTTTG ACTACAAACT GATCGACCAG
TCGGCGCTCG AGATCGTGGA AACCGCCAAG CGCACCGGCG CGGTGGTCAA GGGCCCGGTT
CCGCTGCCGA CTTCGATCGA GCGTTTTGAC GTGCTGCGCT CGCCGCACGT CAACAAGAGC
TCGCGCGACC AGTTCGAGAT TCGCACGCAC CGTCGTCTGA TGGACATCAT GGATCCGACC
GACAAGACGG TCGACGCGTT GATGAAGCTG GATCTGCCGG CCGGCGTCGA CGTCGAAATC
AAGTTGTAA
|
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| Protein sequence | MQNQKIRIRL KAFDYKLIDQ SALEIVETAK RTGAVVKGPV PLPTSIERFD VLRSPHVNKS
SRDQFEIRTH RRLMDIMDPT DKTVDALMKL DLPAGVDVEI KL
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