| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0400 |
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| Symbol | rpsL |
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| ID | 3671667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 432922 |
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| End bp | 433299 |
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| Gene Length | 378 bp |
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| Protein Length | 125 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637709066 |
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| Product | 30S ribosomal protein S12 |
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| Protein accession | YP_314158 |
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| Protein GI | 74316418 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0048] Ribosomal protein S12 |
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| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000378884 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0709429 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCAACGA TTAACCAGCT GATCCGCAAG CCGCGTCAGG CGCCGGTGGA AAAGAGCAAG
GTTCCGGCCC TGAAGGCCTG CCCGCAACGC CGTGGCGTGT GCACCCGTGT GTACACGACG
ACTCCGAAGA AGCCGAACTC CGCGCTGCGC AAGGTCTGCA AGGTCAAGCT CACCAGCGGC
TTCGAGGTCA TCAGCTACAT CGGCGGCGAA GGCCATAACC TGCAGGAGCA CTCGGTGGTG
CTCGTGCGCG GCGGCCGGGT CAAGGATCTG CCGGGTGTGC GTTACCACAC CGTCCGCGGC
AGTCTGGATA CGGCTGGCGT GAAGGACCGC AAGCAGTCGC GGTCGAAGTA CGGCGCCAAG
CGCCCGAAAA AGGCGTAA
|
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| Protein sequence | MPTINQLIRK PRQAPVEKSK VPALKACPQR RGVCTRVYTT TPKKPNSALR KVCKVKLTSG
FEVISYIGGE GHNLQEHSVV LVRGGRVKDL PGVRYHTVRG SLDTAGVKDR KQSRSKYGAK
RPKKA
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