| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0386 |
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| Symbol | |
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| ID | 3671648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 414539 |
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| End bp | 415375 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637709047 |
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| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
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| Protein accession | YP_314144 |
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| Protein GI | 74316404 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0195727 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGG CGTTTCCCGC GCCGGCGAAG CTCAATCTTT TCCTCCACGT CGTCGGTCGC
CGCGACGACG GATACCATCT GCTGCAGAGC GTGTTTCGTC TGATCGACCG CGCCGACACC
GTGCACCTGG AATTGCGCGA TGACGGCCGA ATCGTGCGCG AAGGCGCTTT GCCGGGCGTG
AGCGAAGATC AGGATCTGAC CGTCCGCGCG GCCCGACTCC TGCAGCCCTA CGCGCGCCCG
GGCGCCGGGG TCGGCATCCG TCTCGACAAG CGGCTGCCGA TGGGCGGGGG CCTCGGCGGC
GGCAGTTCCG ATGCGGCGAC CGTGCTGCTC GCGCTCAACC GCCTGTGGGA GGTCGATCTG
CCGCGCCAGC GCTTGCAGGC GCTCGCCCTG CGACTCGGCG CCGACGTGCC GGTCTTCGTT
TTCGGTCAGA CGGCGTTCGC GGAGGGGGTC GGCGAACTGT TGCAGCCGAT CGGCGCGCCG
GTCGCGTGGT ACGTCGTGCT GACGCCGCCG GTGCACGTGC CGACCGCGGC AATTTTTGCC
GCGCCGGAAT TGACACGCAA CACGCCTGCC CTCAAAATAG CGCCCTTTTC CGCGGGCATG
GGTCATAACG ACCTCGAGCC CGTGGTCGTC GGCCGGTACC CGGAAGTCGG TCGCCACCTG
CAGTGGCTCG GTCAGTTCGG GGAGGCGCGG ATGACCGGTT CGGGCGCCTG CGTTTTCGCA
TCGTTCGCAA CCGAGGATGC CGCGCGCAGC GTGCTGCAGG CGCTGCCCGA TACGATGCAG
GGTTTTGTGG CGCGAGGTCT GGACAAGCAC CCCTTGTACG ACTTTGTGCC TGAGTAG
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| Protein sequence | MSQAFPAPAK LNLFLHVVGR RDDGYHLLQS VFRLIDRADT VHLELRDDGR IVREGALPGV
SEDQDLTVRA ARLLQPYARP GAGVGIRLDK RLPMGGGLGG GSSDAATVLL ALNRLWEVDL
PRQRLQALAL RLGADVPVFV FGQTAFAEGV GELLQPIGAP VAWYVVLTPP VHVPTAAIFA
APELTRNTPA LKIAPFSAGM GHNDLEPVVV GRYPEVGRHL QWLGQFGEAR MTGSGACVFA
SFATEDAARS VLQALPDTMQ GFVARGLDKH PLYDFVPE
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