| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0383 |
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| Symbol | |
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| ID | 3672770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 411196 |
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| End bp | 412008 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637709044 |
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| Product | DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_314141 |
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| Protein GI | 74316401 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.428685 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0194534 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGAAC TACCCGAAGT CGAGACCACC CGCGCCGGCC TGTCGCCCCG TTTGCAGGGT
CGCGTGCTGA CCCGCGTCAT CGTTCGCGAG CCGCGTCTGC GCTGGCCGAT CCCGCCCGAC
CTCGACACGC AATTGCGGGG CCTCACGCTC CACGGCCTCG CCCGGCGCGG CAAATACCTG
CTGTTCGACT TCGGCGCTGT CACCCAGCTC GTCCATCTCG GCATGTCGGG GAGCCTGCGC
CTCACCGAGC CCGCGGAGCC CGCTGCGCGC CACGACCACG TCGACTGGCG CTTCGACGAC
GGAACGATCC TGCGCCTGCG CGACCCGCGC CGCTTCGGCG CGGTGCTGCT GACCGAGAAC
GCGCCCGGAC ATCCGCTCCT CGCCGGCCTC GGTCCGGAAC CCCTGAGCAC GGCGTTCGAC
GCGGCCTATC TGCACACGCA GTGCCAGCGT CGCAAGACCG CGATCAAGCC GCTCATCATG
GATGCCCATG TCGTCGTCGG CGTCGGTAAC ATCTACGCTT CGGAATCCTT GTTCCACGCC
GGAATCCGCC CGGGCGTCGC CGCCCACCGC CTAAGCCGGG CGGCGTGCGC GCGGCTGGCC
GACGCGATCA AACAGGTGTT GACTGCGGCC ATCGCAGCAG GCGGCAGTTC GCTGCGGGAC
TACGTCCAAA GCAGCGGCGA ACTGGGGTAT TTCCAGTTGC AGACGCGGGT CTACGACCGC
GAAGACGCGC CGTGCAGGCG GTGCGCAACG CCGATCCGCC GCATCGTCCA GGCGCAGCGT
GCGAGCTTCT ACTGCCCGAC GTGCCAGCGC TGA
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| Protein sequence | MPELPEVETT RAGLSPRLQG RVLTRVIVRE PRLRWPIPPD LDTQLRGLTL HGLARRGKYL
LFDFGAVTQL VHLGMSGSLR LTEPAEPAAR HDHVDWRFDD GTILRLRDPR RFGAVLLTEN
APGHPLLAGL GPEPLSTAFD AAYLHTQCQR RKTAIKPLIM DAHVVVGVGN IYASESLFHA
GIRPGVAAHR LSRAACARLA DAIKQVLTAA IAAGGSSLRD YVQSSGELGY FQLQTRVYDR
EDAPCRRCAT PIRRIVQAQR ASFYCPTCQR
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