| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0345 |
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| Symbol | |
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| ID | 3672131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 363361 |
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| End bp | 364206 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637709006 |
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| Product | sigma-70 factor |
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| Protein accession | YP_314103 |
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| Protein GI | 74316363 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.79091 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0122375 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAGA CAATGTCTTT ACCGATTCCC GCCGCCTACA GTCTGGACAG CTACATCCAG
ACCGTGAGCC ACTATCCGAT GCTCAGCCTC GAGGAAGAGC AGAAGCTGGC GCGCGCGTGG
CATGACGAAC AAGACCTTGA AGCGGCGCGC CGGCTGGTGT TGTCGCACCT GCGCGTCGTG
GTGAGCATCG CTCGGCACTA TCTGGGCTAC GGGCTGCCGC ACGCGGACCT GATCCAGGAA
GGCAACGTCG GCCTGATGAA GGCGGTCAAG CGCTTCGATC CGGACCGCGG CGTGCGGCTC
GTGTCCTTCG CGCTGCACTG GATCCGCGCT GAAATCCACG AATACGTGCT GAAGAACTAC
CGAATGGTCA AGCTCGCGAC GACCAAGGCC CAGCGCAAGC TCTTTTTCAA CCTGCGCAGC
CTCAAGCAGT CGCTCAACGC GCTGACCGTG CAGCAGGCCG ACGCGATGGC GCAGGAACTC
AACGTCAGCC GCAAGGACGT GCTCGAGATG GAAACGCGGC TCTCGGGCCA TGACGTCTCG
ATCGATCCGA TGGTCGACGA CGGCGAGGAC GACTACAGCC CGATCGCCTA TCTCGCGAGC
GCGGAAGAGA ACCCCGCCCA GCGCCTCGAG CGCGAGCAGA CCGAACGACT GCGCGAAAGC
GGCCTCACGA GCGCACTCGA AGAACTCGAC GAGCGCAGCC GCCACATCAT CCAGGCGCGC
TGGCTCAGCG AAGGCGACGT CGCGACGCTG CATGAACTCG CGGCGCAATA CGGCGTCTCG
GCCGAACGCA TCCGCCAGAT CGAAGCGCGC GCGCTGCAGA AGATGCGTGC GTCGATCCCT
GCCTGA
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| Protein sequence | MTQTMSLPIP AAYSLDSYIQ TVSHYPMLSL EEEQKLARAW HDEQDLEAAR RLVLSHLRVV
VSIARHYLGY GLPHADLIQE GNVGLMKAVK RFDPDRGVRL VSFALHWIRA EIHEYVLKNY
RMVKLATTKA QRKLFFNLRS LKQSLNALTV QQADAMAQEL NVSRKDVLEM ETRLSGHDVS
IDPMVDDGED DYSPIAYLAS AEENPAQRLE REQTERLRES GLTSALEELD ERSRHIIQAR
WLSEGDVATL HELAAQYGVS AERIRQIEAR ALQKMRASIP A
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