Gene Tbd_0342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0342 
Symbol 
ID3672128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp360758 
End bp362194 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content65% 
IMG OID637709003 
Productiron-sulfur cluster-binding protein 
Protein accessionYP_314100 
Protein GI74316360 
COG category[C] Energy production and conversion 
COG ID[COG0348] Polyferredoxin 
TIGRFAM ID[TIGR02745] cytochrome c oxidase accessory protein FixG 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0135851 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAAG GTCTAGAAGA ACAGGTCGGT CTCTACCAGA AGCGGATCCC GATCTTCACG 
CGTTCCGTGA AGGGGCCTTT CCGGCGCTTC AAGACCTCGG TGCTGGTGCT CGCCTACGCC
GTGTACTTCC TGCTGCCGTG GCTGCCGTGG TCGCGGCTCG ATGCGCCGGC GCAGGCCGTG
CTGTTCGATC TTCCCGGACG GCGTTTCCTG ATCTTCGGGC TGACCGTCTA TCCGCAGGAC
GTGGTCTGGC TGGCGCTGCT GCTGTTCATC GCGGCTATCT TGCTGTTTTT CGTGACCGGG
CTCTTCGGTC GCGCGTTCTG CGGCTACTTC TGCTTTCAGA CCCTGTGGAC CGATTTCTTC
ATCTGGATCG AGCACAAGAT CCAGGGCGAG CGCCCGGCAC GGGTGCGCCT CTATCGCCAG
CCCTGGGATC GCGAAAAGCT GCTGAAGGTC GGAGGGACGC ACGCGTTATG GCTGCTGGCC
GCCTTTTGGA CCGGCATCAC CTTCGTCGCC TACTTCGCGT ACGCGCCGCA GCTCGTGGTG
GATTTCTTCG CCGGCGCCGC CGCACCGGCG GCCTACATCA CGGTCACCAT CCTGACCCTG
TCGACTTACG CCGCGGCGGG CCTCATGCGC GAGCAGATCT GCACCTACGT CTGCCCCTAC
GGCCGCTTCC AGAGCGTGAT GTACGAAGCC GAAACGCTTG CCGTGCATTA CGACGCGAGG
CGGGGCGAGG GCACGCGCGG CCGCGCCCCC GCGCGCGCGG GACAGCGCAC GCTTGCCGAG
CGCCATGAAA AGGGCGTGGG CGACTGCGTC GACTGCGGAC TCTGCGTACA AGTCTGCCCG
GTTGGCATCG ATATCCGCGA CGGCCTGCAA TACAAGTGCA TCTCCTGCGG CCTGTGCATC
GACGCGTGCA ACACGATCAT GGACTCCTTC AGTTTTCCGC GCGGCCTGAT CCGCTACGAC
TCGGAGAAGA ACCTCGCCGC CGCCACGCCG ACGAAGCCGA AGGCGGACTG GAAGCGTTTG
AAGACGATCG GCTACGGGCT CGCCCTCGTG CTGATGAGTG CGTATCTCGT CTACAGCATC
AGCACGCGCG GCAGCTTCGA TCGCGCCGTC AACCAGATCC GCCAGCCGCT CTACGTCGTG
CTCTCGAACG GCGACATCCG CAACCGTTAC CAGATCCGCA TCACCAACAA GTCGGGGCAG
GACGAGACCT ATGCGATCAG CGCACGCGGC ATCCCGAGCG GGGCGCTCGA CCTCGGCAAC
TTCCGCGAGA TCACCGTGAA GCCTGGCCAC AGCGGAGTCG TCCAGGCGAG CGTCCGGCTG
TCGCCCGAGG CCGCCGCGAG GACCCAGAAC TTCGAACTCG TCATCGCGCC GCGGGGCAAG
CCGGGTGAGG CGCGGACCGA GAGCGTGCGT TTCGACAGCC CGAGGCCACG CGGATGA
 
Protein sequence
MQKGLEEQVG LYQKRIPIFT RSVKGPFRRF KTSVLVLAYA VYFLLPWLPW SRLDAPAQAV 
LFDLPGRRFL IFGLTVYPQD VVWLALLLFI AAILLFFVTG LFGRAFCGYF CFQTLWTDFF
IWIEHKIQGE RPARVRLYRQ PWDREKLLKV GGTHALWLLA AFWTGITFVA YFAYAPQLVV
DFFAGAAAPA AYITVTILTL STYAAAGLMR EQICTYVCPY GRFQSVMYEA ETLAVHYDAR
RGEGTRGRAP ARAGQRTLAE RHEKGVGDCV DCGLCVQVCP VGIDIRDGLQ YKCISCGLCI
DACNTIMDSF SFPRGLIRYD SEKNLAAATP TKPKADWKRL KTIGYGLALV LMSAYLVYSI
STRGSFDRAV NQIRQPLYVV LSNGDIRNRY QIRITNKSGQ DETYAISARG IPSGALDLGN
FREITVKPGH SGVVQASVRL SPEAAARTQN FELVIAPRGK PGEARTESVR FDSPRPRG