| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0338 |
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| Symbol | |
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| ID | 3672124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 357340 |
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| End bp | 358794 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637708999 |
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| Product | cbb3-type cytochrome c oxidase subunit I |
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| Protein accession | YP_314096 |
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| Protein GI | 74316356 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
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| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0297011 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGTAA GCACATATTC CGGAGCAGAG CAGTACAACT TTGATATCGT TAAGAAATTT
GCCGTCATGT CGCTCGTCTG GGCGGTGGTG GGCATGTTCG TCGGCGTCTA CATCGCCTCC
GAACTCGCTT GGCCGTTTCT GAATTTCGAT AGTCCCTATT TTTCGTTCGG CCGTTTCCGG
CCCGTGCACA CGAGCGCGGT GATCTTCGGC TTCGGCGGCT CGGCGCTGTT CGCTACCTCT
TATTACGTGG TGCAGCGTAC CTGCCAGACC CGCCTGATTT CCGACGGCAT GGCGAGCTTC
ACGTTCTGGG GGTGGCAGAC CGTCATCGTC CTCGCGGCGC TTTCCTACGT CATGGGCTAC
TCGCAGGGCC GTGAATACGC CGAGATGGAA TGGCCGATCG ACCTGCTGGT CGAGGTCGTC
TGGGTCACCT ATCTGATCGT GTTCGTCGGC ACCATCATGC GCCGCAAGCA GCCGCACATC
TACGTCGCCA ACTGGTTCTA CCTGTCGTTC ATTCTGGCGA CGGCGCTGCT GCACACCTTC
AATAACCTGG CGATGCCGAT CGACCTGTTC TCGATGAAGT CGTACAGCCT GTTCTCCGGC
ACCCAGGACG CGATGACCCA GTGGTGGTAC GGCCACAACG CGGTCGGCTT CTTCCTGACC
GCCGCCTTCC TCGGCATGAT GTACTACTTC GTGCCCAAGC AGGCCGGCCG CCCGATCTAC
TCCTACCGGC TGTCGATCGT GCACTTCTGG GCGCTTTCCT TCATGTATAT GTGGGTCGGT
GGTCACCACC TGCACTGGAC CGCGCTGCCT GACTGGACCT CCTCACTCGC CGCCGCGTTC
TCGATCCTGC TCTTGATGCC CTCCTGGGGC GGCATGATCA ACGGCATCAT GACGCTGTCG
GGTGCCTGGG ACAAACTGCG TACCGATCCG GTCATGCGCT TCATGATCGT CGCACTGTCG
TTCTACGGCA TGTCGACCTT CGAAGGCCCG ATGATGTCGC TCAAGGAAGT CAACGCCCTC
TCGCATTACA CCGACTGGAC CGTCGGCCAC GTGCACTCGG GCGCGCTCGG CTGGGTCGCC
ATGATCTCGT TCGGCTCGCT GTACCACATG ATGCCCAAGC TGTGGGACAC CAAGATGTAC
AGCCGCAAGC TGGTCGAATG GCACTTCTGG CTCGCGACCA TCGGCATCGT CCTGTACATC
GTCGCGATGT GGATCTCGGG CATCACCCAG GGTCTGATGT GGCGTGCGTT CGACGAGTTC
GGCAACCTCC AATACTCGTT TGCCGAGTCG GTTGCCGCGA TGATGCCTTT CTACGCGATG
CGCGCGATCG GCGGGATGTT CTTCCTCAGC GGCGCCGCGA TCATGGCCTT CAACATGTTC
ATGACCATTC GTCAGGGCAA GCGCGAAAGC GCGGCGCTGG AGGCCAAGCT CGCAGCCAAG
ATGGCTCACG CATGA
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| Protein sequence | MSVSTYSGAE QYNFDIVKKF AVMSLVWAVV GMFVGVYIAS ELAWPFLNFD SPYFSFGRFR
PVHTSAVIFG FGGSALFATS YYVVQRTCQT RLISDGMASF TFWGWQTVIV LAALSYVMGY
SQGREYAEME WPIDLLVEVV WVTYLIVFVG TIMRRKQPHI YVANWFYLSF ILATALLHTF
NNLAMPIDLF SMKSYSLFSG TQDAMTQWWY GHNAVGFFLT AAFLGMMYYF VPKQAGRPIY
SYRLSIVHFW ALSFMYMWVG GHHLHWTALP DWTSSLAAAF SILLLMPSWG GMINGIMTLS
GAWDKLRTDP VMRFMIVALS FYGMSTFEGP MMSLKEVNAL SHYTDWTVGH VHSGALGWVA
MISFGSLYHM MPKLWDTKMY SRKLVEWHFW LATIGIVLYI VAMWISGITQ GLMWRAFDEF
GNLQYSFAES VAAMMPFYAM RAIGGMFFLS GAAIMAFNMF MTIRQGKRES AALEAKLAAK
MAHA
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