| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0313 |
|---|
| Symbol | |
|---|
| ID | 3672099 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 337041 |
|---|
| End bp | 338069 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637708974 |
|---|
| Product | rhamnosyl transferase related protein |
|---|
| Protein accession | YP_314071 |
|---|
| Protein GI | 74316331 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1216] Predicted glycosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0691397 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGAAA GCACACGCAC GCCCCAAACA GCCGCACCGC CATCGGTCGC GATCGTACTG
CTCAACTGGA ACCGCTGGGC CTACACGCTG ACCTGCCTCG AAAGCCTATT CCGCCTCGAC
TACCCGAGCT ACTCGGTCAT CGTCTGCGAC AACGCGTCGT CCGACGACTC GGTGTCGAGG
CTGCGCGCGT GGGCCGGGGG CCGACAGAGC GCACCGCCAC CGTCGGCAGC GGAACTGCAT
CCGCTCGTCG ACCCACCCGT GACCAAGCCG GTCGAGCTGT GCGAAGCGCA GCGCGATGAA
ACGCCGAGCC GGACCCGCCC GCCCGCCCCG CTCATCCTGA TCCAGACCGG CGCCAACCTC
GGCTTCGCGG GGGGCTGCAA CGTGGGCATC CGCCACGCGC TTGCACAGGG GGCCGACTAT
GTCTGGATTC TGAACAACGA CACGGTCGTG GCCGCGGACA GCCTGCGGCA ACTGGTGGCG
GTGCAGCAAT CCGATCCGGA CATCGGCATC GTCGGCTCGA CGCTCCTGAG CATCCACCGC
CCGACGAAGG TGCTCGCGCT CGGCGGCGGG CGTCTGCGAC GCGCGACCGG CGCGACGCGA
CATATAGGCG CGGGAAGGGA CTGGCCCCTG CAACCTCCCG ACCCACGGCC CGAGCCGATG
GACTACGTGA TCGGCGCGTC CATGCTCGTG AGCCGCCACG TTCTTGAAAC GGTGGGGCTC
ATGGACGAGG GCTACTTTCT GTATTACGAG GAGCTCGACT GGGCCTTCCG CCTGCCGCCG
GAGACGCGGC TCGGCTACGC GCCGGCGAGC GTGATCTATC ACCATGAAGG CGGCACGACC
GGCGGGATCG TGCGCCGCCA TTACTATCGC AGTCTGATCC GTTTTACCTG GCGCCACAAC
CGGCGCTGGC TGCCGCTCGT CCTGGCCCGC ATGGCCTTGC GCGTTCCGGA AGCACTGCTT
GCGCGCAACT GGAGCGAGTT CGACGCCCTG CTCTCCCTGT TGCGCCCCGC TCAGATCACG
CGCCGATGA
|
|---|
| Protein sequence | MAESTRTPQT AAPPSVAIVL LNWNRWAYTL TCLESLFRLD YPSYSVIVCD NASSDDSVSR
LRAWAGGRQS APPPSAAELH PLVDPPVTKP VELCEAQRDE TPSRTRPPAP LILIQTGANL
GFAGGCNVGI RHALAQGADY VWILNNDTVV AADSLRQLVA VQQSDPDIGI VGSTLLSIHR
PTKVLALGGG RLRRATGATR HIGAGRDWPL QPPDPRPEPM DYVIGASMLV SRHVLETVGL
MDEGYFLYYE ELDWAFRLPP ETRLGYAPAS VIYHHEGGTT GGIVRRHYYR SLIRFTWRHN
RRWLPLVLAR MALRVPEALL ARNWSEFDAL LSLLRPAQIT RR
|
|---|
| |