Gene Tbd_0309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0309 
Symbol 
ID3672095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp333036 
End bp333992 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content70% 
IMG OID637708970 
Productglycosyltransferase 
Protein accessionYP_314067 
Protein GI74316327 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.544372 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGCCA AGCCGCTCGT CTCGATCGTC ATGCCGTGCT ACGACGCCGC GGCGCATTTG 
CCGGCAAGCG TAGGCAGCGT ACTCGCGCAG ACCTTCGCGG ACTGGGAACT CGTCGCCGTC
GACGATGGCT CGCGCGACGC CACGCTGGCC TGGCTGCAGG CCCAGCGCGA CCCGCGTATC
CGCGTCCTGA GCCAGCCGAA CGGCGGGGTC AGTGCGGCGC GCAACGCGGG GCTGGCCGCG
GCACGGGGCC GCCACGTCGC CTTCCTCGAC GCCGACGACA CCTGGGCGCC GGATTTTCTA
GACGCCATGG TCAACGCGCT GCAGGCGCGA CCCGATGCCG TGCTCGCCTA CTGCGGCTGG
CAGAACGTCG GCCGCGGCGA CAAGGCCGGC GCGCCCTTCG TGCCGCCCGA TTACGAGAAT
CCCGACAAGG CCGAAACACT CTTTGCCGGC TGCCGCTGGC CGATCCATGC TGCGCTCGTT
AGGCGCGACG CGGTGACGGC CGCCGACGGA TTCGATCCCC GGCTCACGAA TGCCGAGGAC
TACGCGCTGT GGCTGCGCGT TGCGCTGAGC GGCGCCATCG TCCGCGTGCC GCGCGTGCTG
GCTTTCTATC ATTTCCACGG CGCAGGCCAG GCCTCGGACG ACCCGGTGCG CGCTGCACTG
CACCACCTCG ACGCCCAGCG TGCGTATCTA GAGAGCCATC CCGCGCTCGC CGCTGAACTC
GGACACACAC GCGTGCGCAC GCTGACCGCC GGCGAACTCC TCAGGCGCGG CTACGCCTGC
TACTGGCGGC GCGACCTGCC CGCGGCGCGC ACGATCTTCC GCGCAGTGAT GCGGCTCGGC
TATGGCACAC TCTCGGACTG GAAATACATG CTGCCCGCCT GGCTGCCCGA GTCGTGGCAT
CGCCGGCTGA TCGACACGCG CGAACGCCAT GCCCGGACAT CCGATGAACA ATCCTGA
 
Protein sequence
MAAKPLVSIV MPCYDAAAHL PASVGSVLAQ TFADWELVAV DDGSRDATLA WLQAQRDPRI 
RVLSQPNGGV SAARNAGLAA ARGRHVAFLD ADDTWAPDFL DAMVNALQAR PDAVLAYCGW
QNVGRGDKAG APFVPPDYEN PDKAETLFAG CRWPIHAALV RRDAVTAADG FDPRLTNAED
YALWLRVALS GAIVRVPRVL AFYHFHGAGQ ASDDPVRAAL HHLDAQRAYL ESHPALAAEL
GHTRVRTLTA GELLRRGYAC YWRRDLPAAR TIFRAVMRLG YGTLSDWKYM LPAWLPESWH
RRLIDTRERH ARTSDEQS