Gene Tbd_0263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0263 
Symbol 
ID3671405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp283766 
End bp285658 
Gene Length1893 bp 
Protein Length630 aa 
Translation table11 
GC content68% 
IMG OID637708924 
Productpeptidoglycan glycosyltransferase 
Protein accessionYP_314021 
Protein GI74316281 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID[TIGR03423] penicillin-binding protein 2 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATCG TCACCCCGCT GAAGAATCTC GACCGCGAGC TTGCCCGTTT CCGCGGGCGC 
GTGAAGTTCG GCGCGGCCTT CGCGCTGCTG CTGGCCGGCG TGCTGCTCGC GCGCGCCTTC
CACCTCCAGG TCGTCGCGCA TGAGCACTAC ATCGAGCGTG CCGAAAGCAA CCGCATTTCG
CTGGTGCCGG CGCCGCCGAA CCGCGGCCTG ATACTCGACC GCAAGGGCCG CGTGCTCGCC
GAAAACTATT CGGCGTACAC GGTCGAGCTG ACGCGCGCGG AGGCCGACGA CATGGAGGCC
ACGCTCGCCG AGATCGGCAA GCTGATCGAG ATCACCCCGG GCCAGCTTCG CCGCTTCCGG
CGTCTGCTCG CCGAATCGCA CGAGTTCGAG ACCGTCCCGC TCAAGAGCAA GCTGACCGAC
GAGGAGGTCG CGATTCTTGC CGCCAACCTT TATCGCCTGC CCGGCGCGGA GGTGCGCGCC
CGCCTGTTCC GCAATTACCA GGGCGGGCCG GGCATGGCGC ACGTCGTCGG GTTCATCGGC
CGCATCAACG ACCGCGACCT CAGGCGTGTG CGCGAGTCGG GGCTCGACAA GGACTACAAG
GGCACGGTCC ATATCGGGAA AACGGGACTC GAGCAGAGCT ACGAGACGCT GTTGCACGGC
CGCGCGGGTT TCGACCGCAT GGAGACCGAC GCGAGCGGCC GCGCCGTGCG CATGATCTCG
CGCATCCCGC CGGTGCCGGG AAAAGATCTG CGTCTGCATC TCGACGCGTC GCTGCAGGAA
GTCGCCGAGC ACGCGTTCGG CGACTATCTC GGCGGCCTGG TCGCGCTCGA CCCCAACACC
GGGGGCGTCC TCGCGCTCGT GAGCAAGCCG GGTTTCGATC CCAATCTGTT CGTCGACGGT
ATCGATCCGG AAACCTGGAA GTCGCTCAAC GAGTCGCCCG AACGGCCGAT GGTCAATCGC
GCCCTGCGCG GCATCTATCC GCCCGGCTCG ACGATCAAGC CGCTGATGGC CCTGGCCGGC
CTCGAACTCG GCCTGCGCGA GCCCGACGAC AGCATCGACG ACCCGGGGTT TTTCCGCCTA
CCCAACAGCC AGCACCGTTT CCGCGACTGG AAGCCCGGTG GTCACGGCAT CGTCGATCTG
CGCCGATCGA TTTCGCAGTC GTGCGACATC TACTATTACC GTCTCGCGGT CGACATGGGC
ATCGACCGCA TGCACGACTA CCTTACGCAA TTCGGCCTCG GCCAGAAGAC CGGCATCGAC
CTGCAGGGCG AGTCGTCGGG GCTGTTGCCG TCGCGCGCGT GGAAGCAGCG GCGCTGGAAG
CAGCCCTGGT ACCCGGGCGA GACCGTGATC GCCGGCATCG GCCAGGGCTA TCACCTGACC
ACGCCGCTGC AGCTCGCGAC GATGACGGCC ATGCTTGCCA ACGGCGGCAA GCGCATCCAG
CCCCGGCTGG TCGACGCCGT ACGCGACCCG CATACGCGGG CCTGGCAGAC GCAGGCGCCG
GTCATGCTCG GTGAGGTGGC GATCGACCCG GAGAATCTCG CGGTCGTGCG CCAGGGCATG
ATGGACGTCA CCCGCCCGGG TGGTACCGCG GCGGCGTCGG CGGCCGGCGC CGCGTATGGC
ATCGCCGGCA AGACCGGCAC CGCGCAGGTC GTCGGCATCA AGCAGGGGGC GCGCTACGAC
GCGACGCGGC TCGCCCGCGA GCACCGCGAC CACGCACTCT TCGTCGCCTA CGCGCCGGCC
GAGAACCCCG TTATCGCGGT CGCCGTGATG GTCGAGAACG GCGGTTCGGG CAGCGGCACC
GCAGCGCCGA TCGCGCGCGC CGTGTTCGAC TACTACCTGA CCGGGAAACG ACCCGGCACC
ATGAAGCTGG AGACCGACGA TGCAGCGGAC TAG
 
Protein sequence
MRIVTPLKNL DRELARFRGR VKFGAAFALL LAGVLLARAF HLQVVAHEHY IERAESNRIS 
LVPAPPNRGL ILDRKGRVLA ENYSAYTVEL TRAEADDMEA TLAEIGKLIE ITPGQLRRFR
RLLAESHEFE TVPLKSKLTD EEVAILAANL YRLPGAEVRA RLFRNYQGGP GMAHVVGFIG
RINDRDLRRV RESGLDKDYK GTVHIGKTGL EQSYETLLHG RAGFDRMETD ASGRAVRMIS
RIPPVPGKDL RLHLDASLQE VAEHAFGDYL GGLVALDPNT GGVLALVSKP GFDPNLFVDG
IDPETWKSLN ESPERPMVNR ALRGIYPPGS TIKPLMALAG LELGLREPDD SIDDPGFFRL
PNSQHRFRDW KPGGHGIVDL RRSISQSCDI YYYRLAVDMG IDRMHDYLTQ FGLGQKTGID
LQGESSGLLP SRAWKQRRWK QPWYPGETVI AGIGQGYHLT TPLQLATMTA MLANGGKRIQ
PRLVDAVRDP HTRAWQTQAP VMLGEVAIDP ENLAVVRQGM MDVTRPGGTA AASAAGAAYG
IAGKTGTAQV VGIKQGARYD ATRLAREHRD HALFVAYAPA ENPVIAVAVM VENGGSGSGT
AAPIARAVFD YYLTGKRPGT MKLETDDAAD