Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0257 |
Symbol | gatB |
ID | 3671399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 277945 |
End bp | 279372 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637708918 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
Protein accession | YP_314015 |
Protein GI | 74316275 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTGGG AGACCGTCAT CGGGCTCGAA GTGCATACCC AGCTCGCCAC CCAGTCCAAG ATCTTCTCGG CCAGCAGCAC GGCCTTCGGC GCCGCGCCCA ACACCCAGGC CAGCGCCGTC GACATCGCAC TGCCCGGCGT GCTTCCCGTG CTCAACAAGG CGGCGGTCGA ATGCGCGATC AAGTTCGGCC TCGCGATCGG CGCGACGCTC AACCGCGTCA ACGTGTTCGA CCGCAAGAAC TACTTCTACC CCGATCTTCC CAAGGGCTAC CAGATCAGCC AGCTCGCCAA GCCCATCGTC GAGGGCGGCG CGCTCACGAT CGTCGTCGAC GGCGTCGAGA AGACGATTCA TCTCACGCGC GCGCACATGG AGGAGGACGC CGGCAAGTCG CTGCACGAGG ACTTCCACGG CATGACCGGC ATCGATCTCA ACCGCGCCGG CACGCCGCTG CTGGAGATCG TCTCCGAACC CGAGATGCGT TCGTCGGCCG AAGCCGTCGC CTACGCGCGC GCGCTGCACA CGCTCGTGAC CTGGATCGGC ATCTGCGACG GCAACATGCA GGAAGGCAGC TTCCGCGTCG ACGCCAACGT CTCGGTGCGC CCGCTCGGGC AGGCCGAATT CGGCACCCGG CGCGAGATCA AGAACCTCAA TTCGTTCCGC TTCCTGCAGC AGGCGATCGA CTACGAAGTG CGCTGGCAGA TCGAGACGCT CGAAGACGGC GGCCGCATCC AGCAGGCCAC GGTGCTGTTC GACCCCGACA CCGGCGAGAC GCGCATGATG CGCAGCAAGG AAGAGGCGCA CGACTACCGC TACTTCCCCG ATCCCGATCT GCTGCCCGTG AAGCTCGACG AGGCGTGGAT CGACGCCGTG CGGACGACCC TACCCGAGCT GCCGGCCGCG ATGCGGACGC GCTTCCAGCA AGACTACGGC GTCTCGGCCT ACGACGCCTC GGTGCTGACC GGCTCGCGCG CGCTTGCCGC CTACTTCGAG GCTGCGGCCC AGCAATCCGG GCAGCCCAAG CTCGCCGCTA ACTGGGTCAT GGGCGAACTG TCCGCCGCGC TCAACAAGGC CGAGCTCGAC ATCGGCGAGA GCCCGGTTTC GGCCGTGCAA CTCGGCACGC TCATCACCCG GATTCAGGAC GGCACGCTCT CCGGCAAGCT CGCCAAGCAG GTGTTCGAAG GGCTGTGGGA AGGCGCCGGC GACGTCGACG GAATCATCGC GGCACGCGGG CTCAAGCAGA TGTCCGACGC AGGTGAACTC GAGAAGATCG TCGACGAGGT ACTCGCCGCC AATCAAAAGT CGGTCGAGGA ATTCCGTGCG GGCAAGGACA AGGCGTTCAA CGCGTTGGTC GGCCAGGTCA TGAAGGCGAG CCGCGGCAAG GCCAATCCCG CACAGGTCAA CGAACTGCTG AAAGCCAAGC TGCAGTAG
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Protein sequence | MKWETVIGLE VHTQLATQSK IFSASSTAFG AAPNTQASAV DIALPGVLPV LNKAAVECAI KFGLAIGATL NRVNVFDRKN YFYPDLPKGY QISQLAKPIV EGGALTIVVD GVEKTIHLTR AHMEEDAGKS LHEDFHGMTG IDLNRAGTPL LEIVSEPEMR SSAEAVAYAR ALHTLVTWIG ICDGNMQEGS FRVDANVSVR PLGQAEFGTR REIKNLNSFR FLQQAIDYEV RWQIETLEDG GRIQQATVLF DPDTGETRMM RSKEEAHDYR YFPDPDLLPV KLDEAWIDAV RTTLPELPAA MRTRFQQDYG VSAYDASVLT GSRALAAYFE AAAQQSGQPK LAANWVMGEL SAALNKAELD IGESPVSAVQ LGTLITRIQD GTLSGKLAKQ VFEGLWEGAG DVDGIIAARG LKQMSDAGEL EKIVDEVLAA NQKSVEEFRA GKDKAFNALV GQVMKASRGK ANPAQVNELL KAKLQ
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