| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0254 |
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| Symbol | |
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| ID | 3671396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 275859 |
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| End bp | 276638 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637708915 |
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| Product | DNA-(apurinic or apyrimidinic site) lyase |
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| Protein accession | YP_314012 |
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| Protein GI | 74316272 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0708] Exonuclease III |
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| TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGAATTA TATCGGCCAA CCTCAACGGC ATCCGTTCGG CGGCCACCAA GGGCTTCTTC
GACTGGCTGC CGACGCAGGG CGCGGACGTC GTCTGCGTGC AGGAACTGAA AGCCCAGGCG
ACCGACCTCA AGCCGGAAGT GCGACAGTGC GACGGGCTCA GCGGGGCCTT TCACTGCGCC
GAGAAGAAAG GCTACAGCGG CGTCGGCGTC TACACGCGCC AGGCGCCGCA GCGCATCGTC
GAAGGTCTCG GCTTGCCCGA ATTCGACGCC GAGGGCCGCT ACATCGAAGC CGATTACGGA
GATCTCGCGG TCATCTCGCT CTATCAGCCT TCGGGCTCGA GCAGCGAAGA GCGGCAGCAG
GCGAAATTCC GCTTCCTCGA TGCCTTCTTT CCCCATCTGG AGAAACTGGT CAAATGCGGC
CGCGAGATCA TCATCTGCGG CGACTGGAAC ATCGCCCACC AGGAAATCGA CCTCAAGAAC
TGGAAATCCA ACCAGAAGAA CTCGGGCTTC CTGCCCGAGG AACGCGCCTG GATGACGCGC
CTGTTCGACG AACTCGGCTG GGTCGACGTC TACCGCAGCC TCTACCCCGC GCACACCGGC
GAGGCCTACA CCTGGTGGAG CAACCGCGGC CAGGCCTGGG CCAAGAACGT CGGCTGGCGC
ATCGACTACC AGATCGCGAC GCCGGGCATC GCGGCGAAGG CCCGCTCGGC TTTCGTGTAC
AAGGAACAGC GGTTTTCCGA CCACGCCCCG CTGGTCGTCG ATTACGACCA TGCGCTGTAG
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| Protein sequence | MRIISANLNG IRSAATKGFF DWLPTQGADV VCVQELKAQA TDLKPEVRQC DGLSGAFHCA
EKKGYSGVGV YTRQAPQRIV EGLGLPEFDA EGRYIEADYG DLAVISLYQP SGSSSEERQQ
AKFRFLDAFF PHLEKLVKCG REIIICGDWN IAHQEIDLKN WKSNQKNSGF LPEERAWMTR
LFDELGWVDV YRSLYPAHTG EAYTWWSNRG QAWAKNVGWR IDYQIATPGI AAKARSAFVY
KEQRFSDHAP LVVDYDHAL
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