Gene Tbd_0249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0249 
Symbol 
ID3671391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp271743 
End bp272690 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content66% 
IMG OID637708910 
ProductABC-type transport system periplasmic component 
Protein accessionYP_314007 
Protein GI74316267 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.79889 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACTG AAGGGCGCTA CACGCTGGTA GGCAGCCTGG TGCTGGCGGT GCTCGCCTCG 
ATGACGCTTG CGATCGTCTG GCTCGCGGGC GGCGCCGACA AAATCGCCTA TCAGAGCTAT
ACGATCTATT TCAGACACCA ATCGCTCGAT GGCCTCGCGG TCGGCAGTGC GGTCAAGATG
CGCGGCATCA AGGTCGGCGT CGTCGAGGGC TTCCGTTTCG CCGACGGCGA CGACGAGGCC
GTGCGCGTCA CCGCAAGGAT CGACGAAGAC GTGCCGGTCC ATGCCGGCGC CGCCGCCTAC
ATCAAACGCA ACCTCGTGAC CGGCATCGCC GCAGTCGAGA TCGACAACGG GCCGGGGAAA
GGCCCGTTGC TCTCCGAGCC GCCCGCGGGC GAGCGTTACC CGGTCATTGC CGAAGGCAGT
TCCGACCTCG ACAAGGTCGC GACGGCGGTG TCGAAGCTCG CGGTGAGCGG CGCGCAGGTG
CTCGACAAGA TGAATACGCT GCTGTCTGAC GAGAACCAGC GCTCGGTCAG CCGGACGCTC
GCCAACCTCA ACGAGTTGTC GGGACATCTG GCGGCCAACA AGCAGAGCCT CGACGCCGCC
GTGCAGGGCA TACGTGACGC GGCCGACGAG TTCCGTTTCG CCGGCGCGAG CATCAATCAG
GCGGCCACGC GCGCCGAGGG CAGCATCACC GTCGTCGGCG AGAACGCGCA GGCCGCGATC
ACAGAAGCGC GCGACGCGAT CCAGAAACTG GAGCGCGACG CGACCCAGAT ATCGGATCGC
CTCGAGCATT TCACCGAGAC CGGAACGCTC GAATTGACCA ATGTGAGCCG CGACGTTCGC
ACGAGTGCCG ACACGCTGAC GACGACCGGC CAGCGCCTGT CGAACCCGCG CGGCATCCTG
TTCGGCCCGA GCGTCGAGCA GCTCGGTCCC GGAGAAGAAT TGCCATGA
 
Protein sequence
METEGRYTLV GSLVLAVLAS MTLAIVWLAG GADKIAYQSY TIYFRHQSLD GLAVGSAVKM 
RGIKVGVVEG FRFADGDDEA VRVTARIDED VPVHAGAAAY IKRNLVTGIA AVEIDNGPGK
GPLLSEPPAG ERYPVIAEGS SDLDKVATAV SKLAVSGAQV LDKMNTLLSD ENQRSVSRTL
ANLNELSGHL AANKQSLDAA VQGIRDAADE FRFAGASINQ AATRAEGSIT VVGENAQAAI
TEARDAIQKL ERDATQISDR LEHFTETGTL ELTNVSRDVR TSADTLTTTG QRLSNPRGIL
FGPSVEQLGP GEELP