| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0241 |
|---|
| Symbol | |
|---|
| ID | 3671383 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 263899 |
|---|
| End bp | 265305 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637708902 |
|---|
| Product | ammonium transporter |
|---|
| Protein accession | YP_313999 |
|---|
| Protein GI | 74316259 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0004] Ammonia permease |
|---|
| TIGRFAM ID | [TIGR00836] ammonium transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.943388 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC TCTTTGCTTC GTTCGGCCTG ATCCTCGCGC TGCTGGCGCC GGGCCTCGCG
GCCGCGCAGG ACGCGGCCGT GCCGATGGAT GGCGCCGCAG CAGTCGAAAC GGCGCCGGCG
GCTGTAGCGC CGGCAGCCGC AGTTCCGGCC GAAACAGCCG CGACGCCGGT CCCAGACAAG
GGCGACACGA CCTGGATGAT GGTCTCGACG TTGCTCGTCG TCCTGATGAT CGTCCCGGGC
GTCGCACTCT TCTACGGCGG GCTCGTGCGC GCCAAGAACA TGCTGTCGGT GCTGACGCAG
GTGATGGCGA TCTTCTGCCT GATATCGGTG CTGTGGGCGG TCTATGGCTA CTCGCTGGCG
TTCGGCGACG GCGGCGGCAT GAACTGGGCG ATCGGCGACC TCTCCAAGCT CTTCCTCGCC
GGGATCACGC CCGACAGCAC CGCCGCGACC TTCTCCGACG GCGTCGTCAT TCCCGAATTC
ACCTTCGTCG CCTTCCAGCT GACCTTCGCC GCGATCACGG TCGCACTGAT CGTCGGCGGG
CTCGCCGAGC GCGTGAAATT CTCGGCGCTG CTCGTGTTCG CGGTGCTGTG GTTCACCTTC
TCCTACCTGC CGATCGCGCA CATGGTGTGG GCGACCGGCG GCTATCTGTT CGAGAAGGGC
GACCTCGACT TCGCGGGCGG GACCGTGGTC CACATCAACG CGGGCGTCGC TGCGCTCGTC
GGCGCGATCG TACTCGGCAA GCGCATCGGC TACGGCCGCG ACGCGATGCC GCCGCACAAC
CTGCCGATGA CGATGATCGG CGCGTCGCTG CTGTGGGTCG GCTGGTTCGG CTTCAACGCC
GGCTCCAACC TCGAAGCGAC CGGCGGCGCG GCGCTCGCCT TCATCAACAC GATACTCGCG
ACCGCCGCGG CAGGGCTGGC GTGGATGTTC GCCGAGTGGA TGGTGCGCGG CAAGCCTTCG
TTGCTCGGCG TCGCGTCGGG CGTGGTTGCC GGGCTCGTCG CGATCACGCC CGCAGCGGGC
CTGGTCGGGC CGATGGGCGG GATCGTGCTC GGCGCGGTCG CCGGCGTCGT CTGCCTGTGG
GGCGTCAGCG GGCTCAAGTC GGCGCTCGGC TACGACGACA GCCTCGACGT CTTCGGCATC
CACGGCATCG GCGGCATCAT CGGCGCGATC GGCACCGGCA TCTTCGTCTC GCCGACGCTC
GGCGGCGTCG GGGTCGACGG CTACACGCTC GCCGGCCAGG TCATGACACA GGCGAGCGGC
GTGCTGATCA CGATCGTGTG GTCGGCGGTC GTCAGCTTCG TCGCCTTCAA GCTCATCGAC
GTGACCCTCG GCTTGCGCGT CGCCGAAGAA CAGGAGCGCG AGGGACTCGA CACCGCGTCG
CACGGCGAGC GCGCGTACTC CGTCTAG
|
|---|
| Protein sequence | MKKLFASFGL ILALLAPGLA AAQDAAVPMD GAAAVETAPA AVAPAAAVPA ETAATPVPDK
GDTTWMMVST LLVVLMIVPG VALFYGGLVR AKNMLSVLTQ VMAIFCLISV LWAVYGYSLA
FGDGGGMNWA IGDLSKLFLA GITPDSTAAT FSDGVVIPEF TFVAFQLTFA AITVALIVGG
LAERVKFSAL LVFAVLWFTF SYLPIAHMVW ATGGYLFEKG DLDFAGGTVV HINAGVAALV
GAIVLGKRIG YGRDAMPPHN LPMTMIGASL LWVGWFGFNA GSNLEATGGA ALAFINTILA
TAAAGLAWMF AEWMVRGKPS LLGVASGVVA GLVAITPAAG LVGPMGGIVL GAVAGVVCLW
GVSGLKSALG YDDSLDVFGI HGIGGIIGAI GTGIFVSPTL GGVGVDGYTL AGQVMTQASG
VLITIVWSAV VSFVAFKLID VTLGLRVAEE QEREGLDTAS HGERAYSV
|
|---|
| |