Gene Tbd_0171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0171 
Symbol 
ID3673617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp184399 
End bp185331 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content66% 
IMG OID637708832 
Productcarbohydrate kinase 
Protein accessionYP_313929 
Protein GI74316189 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.150341 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACGC TCATCTGCGG TTCCCTCGCC TTCGACTCGA TCATGGTGTT CCGCGACCAC 
TTCAAGCATC ACATCCTGCC CGACAAGATT CACATGCTGA ACGTGTCGTT TCTGGTGCCC
GAAATGCGCA GGGAATTCGG CGGCTGCGCC GGCAACATCG CCTACAACCT CAAGCTGCTC
GGCGGCGAGC CGCTGATCAT GGCGACCGTG GGCGACGATT TCGGCATCTA CGGCGAGCGC
CTCGACGCGC AAGCGATCTC GCGCGAATAC ATCCGCCACG TCGCCGGCAC CTACACCGCG
CAGGCCTTCA TCACCACCGA CCTCGACGAC AACCAGATCA CGGCCTTCCA CCCCGGCGCG
ATGAATTTCT CGCACGAGAA CGACGTGCGC GCCGTCCCCG ACGTCAAGCT CGGCATCGTC
TCGCCCGACG GCCGCGACGG CATGCTGCAG CACATCCGCG GCTTTCACGA AGCCGGCGTG
CCCTGCGTGT TCGACCCGGG CCAGGGCATG CCGCTGTTCT CCGGCGAGGA ACTGCTCGAG
TGCGTGCACA AATCGCGCTA CGTCATCCTC AACGACTACG AGGCCGAGCT GCTGCAGAGT
CGTACCGGCG AGAACCTCGA CACGCTCGCG CGCCACGTCG AAGCCCTGAT CGTGACCCGC
GGCGCCGAAG GCTCGGTGAT CCACACCGCG GGACGCGCGA TCGAAATCCC GGCCGTGCGC
CCGGAAGCCG TCCTCGACCC CACGGGTTGC GGCGACGCCT ATCGCAGCGG CATCCTCTAC
GGCATCACCG CCGGACTCGA CTGGGAGACC GCGGGCCAGC TCGCGAGCGT GATGGGCGCG
ATCAAGATCG AGCATCGCGG CGGCCAGAAT CACGCCCCGA GCCGCGACGC CATCGTGGCC
CGGCTCGAAA CCGCATTCGG CACGCGCATT TGA
 
Protein sequence
MRTLICGSLA FDSIMVFRDH FKHHILPDKI HMLNVSFLVP EMRREFGGCA GNIAYNLKLL 
GGEPLIMATV GDDFGIYGER LDAQAISREY IRHVAGTYTA QAFITTDLDD NQITAFHPGA
MNFSHENDVR AVPDVKLGIV SPDGRDGMLQ HIRGFHEAGV PCVFDPGQGM PLFSGEELLE
CVHKSRYVIL NDYEAELLQS RTGENLDTLA RHVEALIVTR GAEGSVIHTA GRAIEIPAVR
PEAVLDPTGC GDAYRSGILY GITAGLDWET AGQLASVMGA IKIEHRGGQN HAPSRDAIVA
RLETAFGTRI