| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0145 |
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| Symbol | |
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| ID | 3673289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 155875 |
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| End bp | 156624 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637708805 |
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| Product | Sel1 repeat-containing protein |
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| Protein accession | YP_313903 |
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| Protein GI | 74316163 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.853386 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCCG CCTGTCCGCT GTGCGGGAGC AAGAAAATCC GCCGCGGTTC GCTCCACGCC
CATGACGGCG TGCGGCACCT GCTGCTCGAC ACGCCATTGC GCTGCCGCGA CTGCCGGCAC
CGCTTCTGGG CATTCAGCCC GCTCAAACCG CTGTTGCTGC TCGTGCTCGT CGGCGCGCTC
GTCGGAGTCA CGGCCTGGCT CGCGCGTGAA CAACGAACGG CAGCGCCCGC CCAGGATGCC
GCGACCGTAT TGCCGCACAC GCGCGCCGAG CAGGGCGACG CCGAGGCGCA GTTGCAGCTC
GCCCTGCGCT ACGCCGACGG CGACGGCGTG ATCCAGAATG ACAAGGAAGC GGCGCGCTGG
TTTGCGCTCG CGGCCAAACA AGGCCTCCCC GAAGCGCAGT ACCGATACGG GCGCGCCTTG
CTCGAAGGCC GCGGCGTCGT TCAGGACTAC AAAGCTGCGT TCAGCTGGAT CGAAAAACCC
GCGCAGCACG GTTACGCGAA GGCGCAATAC AGCCTGGGCG AACTCTATCG CTACGGCACT
GGCACCGCGA TCGACAAGGC GCGCGCCTAT CTCTGGTTCA ACCTCGCCGC CGCGCAGGGC
ATGGAGGCCG CCGCGAAAGC CCGCGACAGC CTGGTGTGGC AGCTCAAGCC CGAGCAGATC
GCCGCGATGC AGGACGAGGC CCGACGCATG AGCCAGGACG CGTCCGCAGC GCCGGCGCCT
GCCACTGCGG AACAGCAGGC GCTTCAATAA
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| Protein sequence | MAAACPLCGS KKIRRGSLHA HDGVRHLLLD TPLRCRDCRH RFWAFSPLKP LLLLVLVGAL
VGVTAWLARE QRTAAPAQDA ATVLPHTRAE QGDAEAQLQL ALRYADGDGV IQNDKEAARW
FALAAKQGLP EAQYRYGRAL LEGRGVVQDY KAAFSWIEKP AQHGYAKAQY SLGELYRYGT
GTAIDKARAY LWFNLAAAQG MEAAAKARDS LVWQLKPEQI AAMQDEARRM SQDASAAPAP
ATAEQQALQ
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