Gene Tbd_0129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0129 
Symbol 
ID3673908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand- 
Start bp138744 
End bp139385 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content69% 
IMG OID637708789 
Productcytochrome c-type protein 
Protein accessionYP_313887 
Protein GI74316147 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.19667 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.20244 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACCAC ACGCAGGTCC CACCCTGGCA GGCGCCCTGA TACTGGCGGC TTCCGCCGCG 
ACTGCAGCGC CGCCCGCCAT CGTCACGCAG GGCAAGGGGG CAGCCACGGC GTGTGCCACG 
TGCCACGGGG CAGACGGCCT TGGCAACGCC CAGGCCGGAT TCCCGATGCT CGCGCAATTG 
CCGCCCGCCT ACCTCGCCAA GCAGATCGCC GACTTCAAGG CCGGCACCCG CAGCAACCCG 
GTCATGTCGC CGATCGCGGC GGCGCTGACG CCCGAGGACA TCGAAGCGAG CGCCCGCTAT 
TACGCGAGTC TGCCACGTCC CGCCGCGCAC GACACGGGCG CTGACCCGGC GACGGTCGAT 
CGCGGCAGAA AACTCGCGAT CGACGGCGCC TGGGACCGTA ACGTACCGCC GTGCTTCAAG 
TGCCATGCGG TGGATGGCGG CGGCGTCCCG CCGAACTTTC CGCCGATTGC CGGGCAGCAC 
GCAAGCTATA CCGTAAGCCA GCTCCAGGCC TGGAAATCGG GTGCGCGCAG CAACGACCCG 
CAAAAGCTCA TGAAGACGGT CGCGCAGAAT CTCAGCGACG AAGACATCCG CGCCGTTGCC 
GCCTACCTGG CGACGCTCGG CAACCGGGGG GCCAAGAAAT GA
 
Protein sequence
MRPHAGPTLA GALILAASAA TAAPPAIVTQ GKGAATACAT CHGADGLGNA QAGFPMLAQL 
PPAYLAKQIA DFKAGTRSNP VMSPIAAALT PEDIEASARY YASLPRPAAH DTGADPATVD 
RGRKLAIDGA WDRNVPPCFK CHAVDGGGVP PNFPPIAGQH ASYTVSQLQA WKSGARSNDP 
QKLMKTVAQN LSDEDIRAVA AYLATLGNRG AKK