| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0126 |
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| Symbol | lpxC |
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| ID | 3673905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 135223 |
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| End bp | 136137 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637708786 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_313884 |
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| Protein GI | 74316144 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00906268 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.116932 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCAAGC AACGCACCCT GAAGACGCCG GTCAAGGCGA CCGGCGTCGG CCTGCATTCG
GGCGTCAAGG TCGAGATGAC GCTGCGACCG GCGGCGCCCG ATTCGGGCAT CGTCTTCCGC
CGCGTCGACC TCGAGCCGCC GGCCGAGCTC AAGGCCGACC CCTACCTCGT CACCGATACC
CGGCTGTGCT CGATGCTCGA GTCCGGTGCG GCCAAAGTGT CGACGGTCGA GCACCTGATG
TCCGCACTTG CCGGGCTCGG GATCGACAAC CTGCTCGTCG ACCTGACCGG GCCGGAAATC
CCGATCATGG ACGGCTCGTC GGCGCCCTTC GTATTCCTCC TGCAGTCTGC CGGCATCGTC
GAGCAGAACG CGGCCAAGCG TTACGTGCGC ATCACGCGCC CGATCGAAGT GCGCGACGGC
GACAAGTGGG CGCGCTTCGT TCCGCACCAC GGGTTCAAGA TCGAGTTCAC GATCGACTTC
AAGCACCCCG TGTTCGACAA GAGCGGGAAG ACCGTGACGA TCGATTTCGC CGACACGGCG
TATACGAAGG AGGTGGCGCG CGCCCGCACC TTCGGCTTCA TGCACGAGGT CGAATACCTG
CGCAATCAAG GCCTCGCACT CGGCGGCTCG CTCGACAACG CGATCGTGAT GGACGAATAC
CGTGTCCTCA ACCAGGACGG GCTGCGCTAC GACGACGAAT TCGTCAAACA CAAGGTGCTC
GACGCCATCG GCGACCTCTA TCTGTTGGGC CATCCGATCA TTGGTGCCTT CGAGGCCTAC
AAATCGGGCC ATGCGCTCAA CAACGCGCTG CTGCGCGAGC TCCTGCAGCA TCGCGAAGCC
TGGGAATTCG TCAGCTTCGA GCACGACGAG GACGTTCCCT CGGCCTTCCT GCGACTGCAT
CCCCTCGCCG CATGA
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| Protein sequence | MIKQRTLKTP VKATGVGLHS GVKVEMTLRP AAPDSGIVFR RVDLEPPAEL KADPYLVTDT
RLCSMLESGA AKVSTVEHLM SALAGLGIDN LLVDLTGPEI PIMDGSSAPF VFLLQSAGIV
EQNAAKRYVR ITRPIEVRDG DKWARFVPHH GFKIEFTIDF KHPVFDKSGK TVTIDFADTA
YTKEVARART FGFMHEVEYL RNQGLALGGS LDNAIVMDEY RVLNQDGLRY DDEFVKHKVL
DAIGDLYLLG HPIIGAFEAY KSGHALNNAL LRELLQHREA WEFVSFEHDE DVPSAFLRLH
PLAA
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