| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0106 |
|---|
| Symbol | |
|---|
| ID | 3673884 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 113057 |
|---|
| End bp | 113629 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637708766 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_313864 |
|---|
| Protein GI | 74316124 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.277757 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0163837 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGC TCGTTTATGG CGTATTGATC GGCGTCGCGC TGACGCAATT GCATGGCTGC
GCCGCGACCC TCGCGGGGGG CGCGGCAGCC GGCACCGCGG CGGCGTTGGA CCGTCGGACC
GCGGGCGTAT TCATCGGCGA CCAGGAAATC GAGTTGCGCG CGATGAACCG TCTGCGCGAG
GCGTTTGCGA AGGGGTCGGT GAGCATTTCG GCGACCAGTT TCAATCGCCA GGTGCTGCTG
ACCGGCCAGG TCTCCGACGA GGCCGCACGT GCCCGCGCGA CCGAGGTCGT CAAGGGCGTT
CCCGACGTGC GGACGGTGTT CAACGAACTG AGCGTCGGCG GGCTCAGCTC GCTGACGTCC
GACGCGAGCG ACGCCACACT GACGGGCAAG GTCAAGACCC GCCTGCTGCG CAGCGAGCGC
GTGCCTGGCG CCAACGTCAA GGTCGTCAGC GAGGCCGGCG TCGTCTACCT GATGGGACTC
GTCACCGACA GCGAGGCCCA CGAGGCGACC GAGATCGCGC GCACGACGGC GGGCGTGACC
AAGGTCGTGA CCCTGTTCGA ATACATCAAG TGA
|
|---|
| Protein sequence | MNKLVYGVLI GVALTQLHGC AATLAGGAAA GTAAALDRRT AGVFIGDQEI ELRAMNRLRE
AFAKGSVSIS ATSFNRQVLL TGQVSDEAAR ARATEVVKGV PDVRTVFNEL SVGGLSSLTS
DASDATLTGK VKTRLLRSER VPGANVKVVS EAGVVYLMGL VTDSEAHEAT EIARTTAGVT
KVVTLFEYIK
|
|---|
| |