| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0095 |
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| Symbol | |
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| ID | 3673873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 100853 |
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| End bp | 102277 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637708755 |
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| Product | metallo-beta-lactamase superfamily protein |
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| Protein accession | YP_313853 |
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| Protein GI | 74316113 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.04699 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.438592 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGA CTTTTCTCGG CGCGGCCCAC GAGGTGACGG GCTCGAGCTA CCTCGTCGAG
GCCGACGGCG TGCGCTTTCT GGTCGACTGC GGGATGTTCC AGGGCGGGCG CGAGGCGCGC
GAAAAAAACC GCCGTCCGTT CGGCTTCGAC CCGGCGGCGC TCGACTTCGT CATCCTGACC
CACGCCCACA TCGACCATTC CGGCCTGTTG CCGCGGCTGG TCGCCGACGG CTACCGCGGG
CCCGTGCACG CGACCCGGGC GACCTGCGAC CTGCTCGCCG TGATGCTGCC GGATTCAGCC
CACATCCAGG AAAAGGAGGC CGAGTACGCG CGCGTCGACC GCTTCGGCGA GTCGGCGAGG
CGCGAGGCCA ATGGCGAGAC CGCGCGCGAC ACGGCGCCGC TGTATACGGT CGCCGAGGCG
CGCGCCGCGC TCGCCCGGCT GAACGGCGTC GACTACGATC TCGAAATCGC GCCTCACCCG
GCTGTGCGCT GCAAATTTCG CGACGCCGGC CACATCCTCG GCTCGGCCAT CGTCGAGCTG
TGGATCGGCG AGGGCGCGAA GCGGCGCAAA CTCGTGTTTT CGGGCGATCT GGGCCAGCCG
GCGCGCCCGC TGCTGCACGA CCCGACGCCG ATCACGGACG CCGACTACCT GGTGGTGGAG
TCGACCTACG GCAACCGCGA TCACAAGACG ATGGCAGCGA CCGAAGACGA GCTCGTCGAG
GCGATCAACG ACACGCTCGA GCGCAAGGGC GGCAACGTCG TCGTCCCCGC CTTCGCGGTC
GGCCGCACGC AGGACATGCT TTATCTGTTC GCCGACCTGA GCCGCCAGGG GCGGATTCCC
AAACTCACGG TGTTCGTCGA TTCGCCGATG GCGACCGCGG CGACCGAGAT CACCTTCAAG
CACATGGCCT TGCTCGACGC CGAGACGCAT CGGCTCATGG GCCGCCACGG CGGCACCGCG
CATTTCCGCA AGCTCGGTTT CGTCGAGGAC GTCGAGGAAT CGAAGGCGCT CGACCGCATC
AAGGGCGGCG CCGTCATCGT CTCGGCGAGC GGCATGTGCG AAGCCGGGCG CATCAAGTTC
CACCTGCGCG CCAACCTCGG GCGGCGCGAG TCGAGCGTGC TCATCACCGG CTTCCAGGCG
GCCGGCACCT TCGGCCGCAG GCTCGTCGAC GGCGCGAAGC AGGTCCGTCT GCTCGGCGAG
GACATCAAGG TGCGCGCCGA TATCTACACG CTCGGCGGCC TCTCGGCCCA CGCCGACCGC
AGCGCCCTGC TCGGCTGGCT CGGGCATTTC ACCAACAAAC CGCGTCGCGT CTTCGTCGTC
CACGGCGAGG AAGACGTCGC GACCGGCTTC GCCGCGACGA TCGCCACGCA GTTCGGCTGG
GATGCGATCG CCCCGACCGG GGGCCGCAGC GTCGTTCTGG ACTAG
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| Protein sequence | MKLTFLGAAH EVTGSSYLVE ADGVRFLVDC GMFQGGREAR EKNRRPFGFD PAALDFVILT
HAHIDHSGLL PRLVADGYRG PVHATRATCD LLAVMLPDSA HIQEKEAEYA RVDRFGESAR
REANGETARD TAPLYTVAEA RAALARLNGV DYDLEIAPHP AVRCKFRDAG HILGSAIVEL
WIGEGAKRRK LVFSGDLGQP ARPLLHDPTP ITDADYLVVE STYGNRDHKT MAATEDELVE
AINDTLERKG GNVVVPAFAV GRTQDMLYLF ADLSRQGRIP KLTVFVDSPM ATAATEITFK
HMALLDAETH RLMGRHGGTA HFRKLGFVED VEESKALDRI KGGAVIVSAS GMCEAGRIKF
HLRANLGRRE SSVLITGFQA AGTFGRRLVD GAKQVRLLGE DIKVRADIYT LGGLSAHADR
SALLGWLGHF TNKPRRVFVV HGEEDVATGF AATIATQFGW DAIAPTGGRS VVLD
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