| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0091 |
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| Symbol | |
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| ID | 3673869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 96510 |
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| End bp | 98153 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637708751 |
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| Product | chaperonin GroEL (Hsp60, Cpn10) |
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| Protein accession | YP_313849 |
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| Protein GI | 74316109 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000116999 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.52877 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCAA AAGACGTACG TTTTGGTGAT TCCGCGCGTC ACCGCATGGT GGCGGGTGTC
AACGTTCTGG CTGACGCCGT CAAGGTGACG CTGGGCCCGA AAGGCCGCAA CGTGGTACTC
GACCGTTCTT TCGGCGCCCC GACGGTGACC AAGGACGGCG TGTCGGTCGC CAAGGAAATC
GAGCTCAAGG ACAAGCTCGA GAACATGGGC GCGCAGATGG TCAAGGAAGT CGCGTCGAAG
ACCTCCGACG TCGCCGGTGA CGGGACCACG ACCGCGACCG TGCTCGCCCA GTCGATCGTC
AACGAAGGCA TGAAGTTCGT CGCCGCGGGC ATGAACCCGA TGGACCTCAA GCGTGGCATC
GACAAGGCGG TCAACGCGAT CACCGAAGAA CTGAAGAAGA TCTCGAAGCC CTGCACGACG
AGCAAGGAAA TCGCCCAGGT CGGCTCGATC TCGGCCAACT CCGACGCCCC GATCGGCCAG
ATCATCGCCG ACGCGATGGA CAAGGTCGGC AAGGAAGGCG TGATCACGGT CGAAGACGGC
TCCGGGCTGG AAAACGAGCT CGACGTCGTC GAGGGCATGC AGTTCGACCG CGGCTACCTG
TCGCCCTACT TCATCAACAA CGCCGACAAG CAGATGGCGA TCATGGACGA TCCCTTCATC
CTCTTGTTCG ACAAGAAGAT CTCCAACATC CGTGACCTGC TGCCCGTGCT CGAGCAGGTC
GCCAAGGCCG GCAAGCCGCT GATGATCGTC GCCGAAGACG TCGACGGCGA AGCGCTCGCC
ACGCTCGTCG TCAACAACAT CCGCGGCATC CTCAAGACCT GCGCGGTCAA GGCGCCGGGC
TTCGGCGACC GTCGCAAGGC GATGCTCGAA GACATGGCCA TCCTGACCGG CGGCACCGTG
ATCGCCGAGG AAGTCGGCTT GAGCCTCGAG AAGGCCACCC TGCAGGATCT GGGCCGCGCC
AAGCGCATCG AGGTCGGCAA GGAGAACACC ACGATCATCG ACGGCGCCGG TGACGGCAAC
GCGATCAAGG GCCGCATCGC CCAGATCAAC AAGCAGATCG AGGAAGTCAC CTCCGACTAC
GACAAGGAAA AGCTGCAGGA GCGCAAGGCC AAGCTGGCCG GTGGCGTCGC CGTGATCAAG
GTCGGCGCTG CGACCGAAGT CGAGATGAAG GAGAAGAAGG CCCGCGTCGA AGACGCGCTG
CACGCGACCC GTGCCGCGGT CGAAGAAGGC ATCGTTCCCG GCGGCGGCGT GGCACTGCTG
CGCGCCAAGG CCGCGGCTGC CGCGATCAAG GGCGACAACC ACGACCAGGA TGCGGGCGTG
AAGATCGTGC TGCGCGCGAT CGAGGAGCCG CTGCGCCAGA TCGTCAAGAA CTGCGGCGAC
GAGCCGTCGG TCGTCGTCAA CAAGGTGCTC GAAGGCGAGG GCAACTTCGG CTACAACGCC
GGCACCAGCG AGTACGGCGA CATGGTCGCG ATGGGCGTGC TCGACCCGAC CAAGGTCACG
CGCACCGCGC TGCAGAACGC CGCATCGATC GCCGGCCTGA TGCTGACTAC CGACTGCATG
GTCGCCGACC TGCCGGAAGA CAAGGCGCCC GCGATGCCGA TGGGTGGCGG CATGGGCGAC
ATGGGCGGCA TGGGCATGAT GTAA
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| Protein sequence | MAAKDVRFGD SARHRMVAGV NVLADAVKVT LGPKGRNVVL DRSFGAPTVT KDGVSVAKEI
ELKDKLENMG AQMVKEVASK TSDVAGDGTT TATVLAQSIV NEGMKFVAAG MNPMDLKRGI
DKAVNAITEE LKKISKPCTT SKEIAQVGSI SANSDAPIGQ IIADAMDKVG KEGVITVEDG
SGLENELDVV EGMQFDRGYL SPYFINNADK QMAIMDDPFI LLFDKKISNI RDLLPVLEQV
AKAGKPLMIV AEDVDGEALA TLVVNNIRGI LKTCAVKAPG FGDRRKAMLE DMAILTGGTV
IAEEVGLSLE KATLQDLGRA KRIEVGKENT TIIDGAGDGN AIKGRIAQIN KQIEEVTSDY
DKEKLQERKA KLAGGVAVIK VGAATEVEMK EKKARVEDAL HATRAAVEEG IVPGGGVALL
RAKAAAAAIK GDNHDQDAGV KIVLRAIEEP LRQIVKNCGD EPSVVVNKVL EGEGNFGYNA
GTSEYGDMVA MGVLDPTKVT RTALQNAASI AGLMLTTDCM VADLPEDKAP AMPMGGGMGD
MGGMGMM
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