Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0090 |
Symbol | |
ID | 3673868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 94422 |
End bp | 96311 |
Gene Length | 1890 bp |
Protein Length | 629 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637708750 |
Product | CBS signal-transduction protein |
Protein accession | YP_313848 |
Protein GI | 74316108 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.382061 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGAGG CTGTCAATTC GCTGGTCCAG GCGACCGTCG ACCACCTCGC TCAGTTCGCC CCCTTCGATC AGATGGCACG CGAGCACCTG CTCTGGATGG CCCGGCGATT GTCGCTCGGC TATTTCGCCC AGGGCGAGGT CATTCTTGCG CCCGAGCAGG TCGCGCCGCT GCAGTTTTTC GTGATCAAGC AGGGGGTCGT GCAAGGTGAA CAGGGCCGCG CGCAAACTAC GGACGGCGCG CCCTGGCTCG AGCTGCGCGA AGGCGAATGT TTCCCGCTCG GCGCGCTACT CGCCGAGCGC CCGGTCACGA GCGTCTACCG CGCCGGCAGC GACGCCTTCT GCTACCAGCT CGCGGCAGCG GATTTCCTGC AGTTGACGCA GCTGAGCGAG CCCTTCAAGG ATTTTTGTAC GCGGCGGATC GCCAATCTGC TCGAGCATTC GCTGCGCCGG ATTCACGCCG GCTACTCGAG GGCAAGCGCC GAGCAGCAGT CGATGAGCAG CCGCCTCGCG GCCATCGTGC GCCGCGAGCC CGTGACCTGC TCGCCGCAAA GCTCGGTGCG GCAGGCCTTG CAGTCGATGA AGACACAGGG CGTCGGGGCG ATGGTCGCCG TCGAAAATGG CGTCCCGCGA GGCATCCTCA CGCTTCACGA CGTGTTGGAC CGCGTCGCGC TCGCGGGCGC CGACCTCGAA CGGCCCGTGA TCGACATCAT GAGCACGCAA CTCACCACGC TGCCGCCGCA CGCGCTTGCC CACGATGCGG CGCTGACCAT GGCCAAGGAG GGCATCCGCC ACGTTCTCGT GACCGACAAC GGCCGCCTCA CCGGCGTGGT CTCGGAAAAG GATCTGTTCA GCCTGCAACG CGTTGGGCTC AGCGAAATCA GCACGGCGAT CCGTCACGCG CCCGATCTCG ATCTGCTCAA GCAGAGCGCT CGCGACATCC AGCAGCTCTC GCGCAACATG CTCGCGCAGG GCATCGCAGC CGAGCAGTTG ACGCAGATCA TCACCACGCT CAACGACCTG CTGACGACGC GTGTCATCGA GCTCGAATTG CAGGAGAGTC CCGCCCGCGA CATCGAATTC TGCTGGCTAG CGCTGGGCTC CGAGGGGCGC TTCGAGCAGA CGCTGAACAC CGATCAGGAC AACGGCATCA TCTTCGCGCC GAAGGCGGGC GAGTCGCCCA CCGCGCAGCG CGAGGCGCTA TTGCCCTTCG CCAAACGCGT CAACCTCGCG CTCGCCGAAT GCGGGTTTCC GCTCTGCGGC GGCGAGGTCA TGGCGTCGAA TCCGAAGTGG TGCCTTTCGC TCGAGGAATG GCAGGACACC TTCGACCGCT GGATCTATCA CGGCGCGCCG ATGGACCTGC TGCATGCGAC GATCTTCTTC GATTTCCGTC CGCTCTACGG TGCGGTCGGT CTCGGCGTCG AATTGCGCGA CTGGCTGCGC GCCGCCGCAC CGAAGAACTC GCGCTTCCTG CACCAGCTTG CGGTCAACGC CCTGCGCAAC CGCCCGCCGC TCGGGGTCGT GCGCGACTTC GTCACCGGCG ACGATCACGC GGTCGACCTC AAGCTCAACG GCATCACCCC CTTCGTCGAC GCTGCGCGCA TCTTCAGTCT CGCGATCGGC GGCACGCAGA CCAACACGCT CGAGCGCCTG CGCGAGATCG CGGCGCCGCT GAAGCTTGCC AGCCGCGATG TCGACGCCTA CTGCGAGGCC TTCCTCTTCA TCCAGCTGTT GCGCCTGCGC CTTCACCACG GACAAAGCGA ACAGGGTGCG TCGCTCGGCA ACCGGGTCGA CCCCGACACG CTCAACAATC TCGACAGCCG CATCCTCAAG GAAGCCTTCC GCCAGGCGCG CAAGCTGCAG ACCAAGCTCG GCCTGCACTA CCAGGTATGA
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Protein sequence | MSEAVNSLVQ ATVDHLAQFA PFDQMAREHL LWMARRLSLG YFAQGEVILA PEQVAPLQFF VIKQGVVQGE QGRAQTTDGA PWLELREGEC FPLGALLAER PVTSVYRAGS DAFCYQLAAA DFLQLTQLSE PFKDFCTRRI ANLLEHSLRR IHAGYSRASA EQQSMSSRLA AIVRREPVTC SPQSSVRQAL QSMKTQGVGA MVAVENGVPR GILTLHDVLD RVALAGADLE RPVIDIMSTQ LTTLPPHALA HDAALTMAKE GIRHVLVTDN GRLTGVVSEK DLFSLQRVGL SEISTAIRHA PDLDLLKQSA RDIQQLSRNM LAQGIAAEQL TQIITTLNDL LTTRVIELEL QESPARDIEF CWLALGSEGR FEQTLNTDQD NGIIFAPKAG ESPTAQREAL LPFAKRVNLA LAECGFPLCG GEVMASNPKW CLSLEEWQDT FDRWIYHGAP MDLLHATIFF DFRPLYGAVG LGVELRDWLR AAAPKNSRFL HQLAVNALRN RPPLGVVRDF VTGDDHAVDL KLNGITPFVD AARIFSLAIG GTQTNTLERL REIAAPLKLA SRDVDAYCEA FLFIQLLRLR LHHGQSEQGA SLGNRVDPDT LNNLDSRILK EAFRQARKLQ TKLGLHYQV
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