Gene Tbd_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0087 
Symbol 
ID3673865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp91560 
End bp91826 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content59% 
IMG OID637708747 
Producthypothetical protein 
Protein accessionYP_313845 
Protein GI74316105 
COG category[S] Function unknown 
COG ID[COG4327] Predicted membrane protein 
TIGRFAM ID[TIGR03647] probable solute:sodium symporter small subunit 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.161414 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAGC CACAAAATTT CGATCCCCAG GCGTACTGGC GCGCGACCTT GCGCCTGCTC 
GTCGCAACCC TGGTCATCTG GTTCGTCGTT TCTTTCGGGG CAGGCATCCT GTTCCGCGAT
GCGCTCGACA CGGTCCGCAT CGGCGGTTAT CCGCTGGGCT TCTGGTTCGC CCAGCAGGGG
TCCATTTTCA TCTTCGTCGG TCTGATCTTC TGGTATGCCA AGCGCATGGA CAAGATCGAC
CGTGAGCACG ACGTCCACGA AGAATAA
 
Protein sequence
MSQPQNFDPQ AYWRATLRLL VATLVIWFVV SFGAGILFRD ALDTVRIGGY PLGFWFAQQG 
SIFIFVGLIF WYAKRMDKID REHDVHEE