| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0084 |
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| Symbol | |
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| ID | 3673861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 86420 |
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| End bp | 88381 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637708743 |
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| Product | histidine kinase |
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| Protein accession | YP_313842 |
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| Protein GI | 74316102 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.218046 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGGACG ATTCGAATAA ATTACTGCAG AAGTCGCAGC TAACGACGCT GCCGTGCGCG
CCTGGCATCG TTGCCGAGGC GCTCGGGCAT CTGTCGAGCG GCGACGCGGC CGCGCTCGCG
GCCTGTGTTC GCTTCGATCC TGTGTTGCTG CTCCGCCTGC GCGCGCTCCC CGAGTTGTTC
GAGCCGCAGC ACCAGGACCT GCTGCGCGGC GTGTTGCTTG CGGCGCCGGT CGCGGCCGGC
GTCGCGCAAG GTCCATACGG CGCCGCCTGG CGCCAGTCGC TTGCGGTCGC GCATCTGGCG
CGCGCGCTCG CCGGGCGCTG TGCCGGCGCG GATGCTGATG CCGCCTGGCT TGCGGGCGTC
GCGCACAATC TTGCCGATTA CCCGGCCGCC GATGCCTGCT CCGCGGCGCA GGTCGCAGCC
TGGGTCGACG ACCCCGACGC CGCCCCCTGG CTCGCCGATG CCCTGCGTTA CCACGCCGAG
CCGCTGGCCC GCGGGCGGGC GGCCCATCCG TTGCTGCGCG TCGTCCAGCT TGCCTTCCAG
CTGGTCACCC GCCCGGACGC GCTTGACAGT GTCGATGTGC GCGCTGCCCT CGCTGCGCTG
CCGCTGGGCG CCGCCGAAGG GGGGCAATTG CTCGCCGATG CGCGGCTGCA GGCAGGCCAG
CACGCCGAGC GCTTTGGCCT CGCCGGGACG CAGGACCCGC CGTCAGGCGA GGCGCTCGAA
CGCCTCGCCC GGCTTTACGC GGCGCAAGCC GCGCACGCGG CGCTGCATGA ATACTTTCGC
GAGGCGCGCG ACGCTGCGCA GGTGTTCGCC CACTGCAGCC ACGCGTTCGG CGCCTTGTTC
GGCATCGAGC GGGCAGCCGT TTTCGCGGTC GCTGAAGGCG CTGTCTTGCG TCCGGCGGCG
CTGCTGCCCG CGCCGGCAGC GCTCGACGCG CTCGCCGTTC CGGTCGACGA CGGGCATTCG
ACGCTGTCGC GTGCGATCGC GGGGCAGGCG CCCCAATCCT TCGAAGGCGG CGACGCGGCG
GCGCTGGTCG ACGTGCAGAT CGCGCGCGTG CTGGGGGTTT CGAGTTTCGT TTGCCAGCCG
CTCGTTTTGC CCGACGGGCG CAGCGCGGTG CTGCTCGCCG GCGATCCGGT TCCCGGGATC
GCCGGCGCGC CGCTCTGGCG CTTCCTGCTC GCGGAACTCG CGACGGCGCT GCAGCCGGTG
AGTGTCGCGT TGGCGGCCGG CGCGATCGTG CCCGAGCCGG CGGCGGACGC CATCTCCCGC
GACCGCGTGC GGCGTGCGAT CCATGAGGTG GCGAACCCGC TGACGATCAT GCGCAACTAC
GTCAACCTGC TGTCCGACCG TCTCGGGGCG GATTCGTCGG TGCAGCGCGA CCTCGGCATC
ATCGGGGACG AGATCGAGCG CGTGGCGCGC ATCGTTCGGG GCATCACGCT CGCCGAGGAA
CATCCTGTGC CGAGCGCGCC GCTCGAAGCG GTGTCGGTCA ACAGCGTCGT GTCCGAACTC
GTGCGCATGG CGCTCGGCAC ACTCTTCACA CCGAACAAGG TCAACGTGCA GATCGATCTT
AATCCCAACC TGCCGCCGCT GCCGCTGCAG AAGGATCTGC TGAAGCAGGT CCTGTTCAAC
CTCGCGAAGA ACGCGGTCGA AGCGATGCAG GCCGGCGGAC AACTGAAATT CACGACCCGG
CTCGCCCGCG CCAACGAGCA GTCCGTCATC GAGATCGAGG TCGCCGACAC CGGCCCGGGT
TTGCCGGCCG CCGTGGCGGC GCGTCTGTTC GAGCCCGTCG TCAGCGAAAA GGGCGGCGAC
CATGCCGGCC TCGGTCTGGC GATCAGCCGC AATCTGGTCG AACGCATGAA CGGGCAGCTC
AGCTGCACCA GTACGCCGCA AGGCAGCCAT TTTCTGATCC GCCTGCCTGC GCTGCAAGGC
GGTCAGGTGC CCCTCACGAC AACACGCTAC GGGTCGATGT AA
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| Protein sequence | MGDDSNKLLQ KSQLTTLPCA PGIVAEALGH LSSGDAAALA ACVRFDPVLL LRLRALPELF
EPQHQDLLRG VLLAAPVAAG VAQGPYGAAW RQSLAVAHLA RALAGRCAGA DADAAWLAGV
AHNLADYPAA DACSAAQVAA WVDDPDAAPW LADALRYHAE PLARGRAAHP LLRVVQLAFQ
LVTRPDALDS VDVRAALAAL PLGAAEGGQL LADARLQAGQ HAERFGLAGT QDPPSGEALE
RLARLYAAQA AHAALHEYFR EARDAAQVFA HCSHAFGALF GIERAAVFAV AEGAVLRPAA
LLPAPAALDA LAVPVDDGHS TLSRAIAGQA PQSFEGGDAA ALVDVQIARV LGVSSFVCQP
LVLPDGRSAV LLAGDPVPGI AGAPLWRFLL AELATALQPV SVALAAGAIV PEPAADAISR
DRVRRAIHEV ANPLTIMRNY VNLLSDRLGA DSSVQRDLGI IGDEIERVAR IVRGITLAEE
HPVPSAPLEA VSVNSVVSEL VRMALGTLFT PNKVNVQIDL NPNLPPLPLQ KDLLKQVLFN
LAKNAVEAMQ AGGQLKFTTR LARANEQSVI EIEVADTGPG LPAAVAARLF EPVVSEKGGD
HAGLGLAISR NLVERMNGQL SCTSTPQGSH FLIRLPALQG GQVPLTTTRY GSM
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