Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0083 |
Symbol | |
ID | 3673860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 85295 |
End bp | 86260 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637708742 |
Product | D-alanyl-D-alanine carboxypeptidase-like protein |
Protein accession | YP_313841 |
Protein GI | 74316101 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.306187 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCCC TTGTCTCCGG ATTGATCCTG TTGTGCATCC ATACCGGCGC CGCCGCGCTC GAGCCGCAGG CGTCGCTGCG CTGGAGCGAG CGTCTGGAGG CGCAGCCGGA CGCCGAGCCC GTCGTCGACT ACGCTCCGAT GCCGGAGCTC AGCGCGCAGT CCGTCCTCGT GTACGACCAG GCGAGCGGAC AACCGCTGCT CGCGAAGAAC GCGACGATGC AGACGCCGAT CGCCTCGATC ACCAAACTCA TGACCGCGAT GCTGGTCATC GATGCCGACC AGCCGCTCGA TGAACGGATC ACGATCACCT CCGCCGACCG CGACACGCTC AAGGGCACGG GCTCCCGGCT CGCGATCGGA TCGAGCTACA CGCGCGGCCA GTTGCTGCAT CTCGCGCTGA TCGCGTCGGA CAACCGCGCG GCGCATGCGC TCGGCCGCAG CTACCCGGGC GGGATCGACC GCTTCGTCAG CACGATGAAC CGCACCGCGC GTGCGCTCGG CATGCACGAC ACCGTCTATG TCGAGCCGAC CGGCCTGTCG AGCGGCAACC GTTCGACCGC GCAGGATCTC GCGAAGCTCG TCGACTTCGC GTATCAGAAC TTCTCGGAAA TCCGCAATAT CAGCACGACC GGCTACTACA CGCTTGGCAC CCAGCGCGTG GTCGTCAAGA AGAAGCGCAA GAAGGCTCGC GTGCTCTACC GTCCGGTCGC CTTCAACAAC ACCAACCGCC TGACGCGGAT GGACGATTGG GTGATCGGTT TGTCGAAAAC CGGTTTCATC AACGAGGCCG GGCACTGCCT CGTCATGCAG GCGCAGATCG CCGAGCGCGA CGTCATCATC GTGCTCCTCG ACGCCACCGG GACGAATCGC CGCGCGGGCG ACGCCGCCCG CATCAAGGCC TGGCTCGAAT CGATGGGCAC GTCGCGCAGC GCCGACAACC GCTACTCCGC CGCGTCACGC ACCTGA
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Protein sequence | MKALVSGLIL LCIHTGAAAL EPQASLRWSE RLEAQPDAEP VVDYAPMPEL SAQSVLVYDQ ASGQPLLAKN ATMQTPIASI TKLMTAMLVI DADQPLDERI TITSADRDTL KGTGSRLAIG SSYTRGQLLH LALIASDNRA AHALGRSYPG GIDRFVSTMN RTARALGMHD TVYVEPTGLS SGNRSTAQDL AKLVDFAYQN FSEIRNISTT GYYTLGTQRV VVKKKRKKAR VLYRPVAFNN TNRLTRMDDW VIGLSKTGFI NEAGHCLVMQ AQIAERDVII VLLDATGTNR RAGDAARIKA WLESMGTSRS ADNRYSAASR T
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