| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0078 |
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| Symbol | |
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| ID | 3673277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 80265 |
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| End bp | 82142 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637708737 |
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| Product | regulator of nitric oxide reductase transcription |
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| Protein accession | YP_313836 |
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| Protein GI | 74316096 |
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| COG category | [K] Transcription |
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| COG ID | [COG3901] Regulator of nitric oxide reductase transcription |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.196865 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTATC CGCATTTGGC AAGCGCAGCT TCGCGCCCGG CGAGTCGGGT CGCGCGGCTT
CGCCCTGGCG CCGTCTGGTC GCTGCTGATC GCGTTCATGC TGCTGTTCGG CACGATCCCG
AATGCGGCGG CCGACCTCAG CGCACGCTAC CCGCAGGTGC GGGCATTGTT TCCGGACGCC
GACCGCTTCG GCGAATCCGA GGGCGATCCG CCGGCAAGCG CGGTCTACGC CGACAACGTG
CTGGTCGGCT ACGCCTTGCT CACCGCCGAC ATCGCGCCCA TCCCCGCATA TTCCGGCAGC
CCGATCAACG TCCTGGTCGG CATCGATACC GGCGGACGCA TCGTCGGCGC GCGCATCGTC
CACCACGAGG AGCCGATCCT CGCCGCGGGC ATCAGCGAGG CGCGCCTCGC CAGATTCGTC
GACCAGTACC GCGGCAAGCC GACGAACGGC CGGATCAGCG TCGGCGCCGC GCGGGAAGGC
TACGCGGCGG TCGACACGAT CTCGGGCGCG ACGATTTCGG TCATGGTCAT CAATGCGTCG
ATCACGCGCG CGGTGCGCAG GGTCGCAGAA TCGCGCGGCA TCGCCGTGCA GGCGGCGCCG
ACCATTCCAC CCGCTACCGC TCCCCTCGCT GCGGCTTTAC CCGCTGCCGT GCCGGCCGAA
GCGCAGCGCT CCCGCGAGCC GCCCGCCAGT CGGTCGACAC CCGGCCCGAG TGTGCCGGCC
GCCGTAGACA AGGCGCCGGC GGCGAACCCG TCCGTCGCCC CCGCGGCGGC ACCACCGCCG
GCGACCCGCG AGGCCGCACC GGCCGCGACG CCGCGTCTCG CCGCACCCTC ACCGCCCGAA
GCCAGCTTCG CCGAGGAGCC GATGTGGCAG ACGGTGTGGC GGCAGCGCAA GCTCGACATC
GCCTTGCTCG GACTCGGCCT CGTCGTCCTG ACGTGCATCC TGCTGTTCCA GGACTACCTC
GCGCGCCGCC CCGCGCTATT GCGCTGGGTG CGGCTGGGAT TTCTCGTCTA CACGCTGGGT
TTCATCGGCT GGTATGCGCT CGGCCAGCTC TCGATCATCA ACGTCCTGAC CTTCGTTCAG
GCGATCACCC ACCAGTTCAG CTGGGATACC TTCCTGATCG ACCCGATGCT GTTCATCCTC
TGGTCGTTCG TCGCGGTCAC GCTGCTGCTC TGGGGACGCG GCGTCTACTG CGGCTGGCTG
TGTCCGTTCG GCGCCCTGCA GGAACTGAGC TTCCGCCTCG CGCGGCGGCT CAGACTGCCG
TCTTTCGAAA TCCCCCACGT CGTCCACGAG CGCATGCTCG CGCTCAAGTT CGTGATCCTG
CTGGTCTTGT TCGCCCTGTC GCTGCAGTCG ATGGGGCTCG CCATCCGGGT GGCCGAGGTC
GAGCCCTTCA AGACGGCGAT CAACTTCCGT TTCCAGCGCG AGTGGGGCTA CGTCGCCTTC
GCCGTGGCGG TGCTCCTACT CTCGACCTTC AACCGCAAGT TCTATTGCAA ATACGTCTGC
CCGCTCGGCG CGTCGCTGGT TTTTCCCGGC CGCTTCCACT CCTTCGAATG GCTGCGCCGG
CGCAAGGAAT GCGGCCGGCC CTGCCAGGCC TGCGCGGTCG AATGCGAGGT GCAGGCGATC
CGGCCGACCG GCGAAATCGT CGTCAACGAG TGTCATCACT GTCTCGACTG CCAGGTTACC
TACTATAACG ATCACAAATG CCCGCCGCTG GTCGAGAAAC GCAAGCGCCA CGAACGCAGC
AGCGCTCGCG AAGCGAGCGG CCCGGGGGCG GCCGAACTGG CACGGATCGC TGTCAGCGCC
AGGCCCGCTC GCGGCGCGGC GAGTGCGAAT GCAGAAAAAC CACAGGCGGT CGATGGGAAT
CGTGTGCCGT TGACCTAA
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| Protein sequence | MSYPHLASAA SRPASRVARL RPGAVWSLLI AFMLLFGTIP NAAADLSARY PQVRALFPDA
DRFGESEGDP PASAVYADNV LVGYALLTAD IAPIPAYSGS PINVLVGIDT GGRIVGARIV
HHEEPILAAG ISEARLARFV DQYRGKPTNG RISVGAAREG YAAVDTISGA TISVMVINAS
ITRAVRRVAE SRGIAVQAAP TIPPATAPLA AALPAAVPAE AQRSREPPAS RSTPGPSVPA
AVDKAPAANP SVAPAAAPPP ATREAAPAAT PRLAAPSPPE ASFAEEPMWQ TVWRQRKLDI
ALLGLGLVVL TCILLFQDYL ARRPALLRWV RLGFLVYTLG FIGWYALGQL SIINVLTFVQ
AITHQFSWDT FLIDPMLFIL WSFVAVTLLL WGRGVYCGWL CPFGALQELS FRLARRLRLP
SFEIPHVVHE RMLALKFVIL LVLFALSLQS MGLAIRVAEV EPFKTAINFR FQREWGYVAF
AVAVLLLSTF NRKFYCKYVC PLGASLVFPG RFHSFEWLRR RKECGRPCQA CAVECEVQAI
RPTGEIVVNE CHHCLDCQVT YYNDHKCPPL VEKRKRHERS SAREASGPGA AELARIAVSA
RPARGAASAN AEKPQAVDGN RVPLT
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