| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0075 |
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| Symbol | |
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| ID | 3673274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 76898 |
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| End bp | 78073 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637708734 |
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| Product | heme d1 biosynthesis protein NirF |
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| Protein accession | YP_313833 |
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| Protein GI | 74316093 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3391] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.61983 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCTA GGATTCCCGT ACTTTTTCTG CTTGCCCTCG GCGCCCTGAC GGGCTGCGCC
GGCACGAACC TGCGCGGCAC CGGCGACCTC GGCGTCGTCA TCGAACGCGC CAGCGGCAGC
GTGCAGATTC TCGACACCAG CCGACGCACC AGCCTGGCGA AAGTGGAGGG CCTCGGCGAC
CTCTCCCACG CCTCCGTCAG CTACTCCCGC GACGCGCGCT ATGCCTATGT ATTCGGCCGC
GACGGCGGAT TGAGCAAGAT CGATCTGCTA ACCCAGCGCA TCGATCGCCG CATCATCCAG
GGCGGCAACA GCATCGGCGG CGCCATCTCG GCCGACGGCA AGCTGGTCGC CGTGGCCAAC
TACCAACCCG GCGGCGTGAA AGTATTCGAC GCCGACACGC TTGCGCTCAT CGCCGACATT
CCCGCCATCG GCGCCGATGG CGCGCGCTCC AAGGTCGTCG GCCTGGTCGA CGCCCCCGGG
CAGCGCTTCG TGTTCAGCCT GTTCGAGGCC GGCGAGATCT GGGTCGCCGA CATGCACGAG
CCGAAGCGGC CGCTGCTGCG CAAATTCGCC GCTGCCGGCA AGGAACCTTA CGACGGCATG
ATCACCTCCG ACGGCCGCCA CTACGCCGCC GGCCTCTTCG GCGAGGACGG GGTGGCCCTG
CTCGATCTGT GGAACCTCGA CACCGGCGTC AAGCGCGCGT TGGTCGAGTT CGGCCGCCAC
GGCGAGAAAC TGCCGGTCTA CAAGATGCCC CACCTGGAAG GCTGGGCCGC GACCGGCGGC
CGGATCGTGC TGCCCGCGGT CGGCAAGCAC GAGGTCATCA TCGCCGACCA GACCAGCTGG
AAGGAAATCG CGCGCGTTCC GGTCGCCGGC CAGGCGGTGT TCGCGGTGGC ACGCCCCGAC
GGGCGCCAGG TGTGGATCAA CTTCGCCTTT CCCGACAACG ACACGGTGCA GGTGCTCGAC
CTGCCCTCGC AGCGCATCGT GCAGACCCTG AAGCCCGGCA AGGGGGTGCT GCACCTGGAG
TTTTCCCCGC GCGGCGAGCA GGTCTGGCTT TCGCTGCGCG ACGAGAATCG CATCGAGATC
TACGACCCCG ATACCTTCGC CCGCATCGGC ACCCTGCCTG CGCAGAGCCC GAGCGGAATC
TTCTTCACCG TGCGTGCCCA CAGGATCGGA CTATGA
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| Protein sequence | MRARIPVLFL LALGALTGCA GTNLRGTGDL GVVIERASGS VQILDTSRRT SLAKVEGLGD
LSHASVSYSR DARYAYVFGR DGGLSKIDLL TQRIDRRIIQ GGNSIGGAIS ADGKLVAVAN
YQPGGVKVFD ADTLALIADI PAIGADGARS KVVGLVDAPG QRFVFSLFEA GEIWVADMHE
PKRPLLRKFA AAGKEPYDGM ITSDGRHYAA GLFGEDGVAL LDLWNLDTGV KRALVEFGRH
GEKLPVYKMP HLEGWAATGG RIVLPAVGKH EVIIADQTSW KEIARVPVAG QAVFAVARPD
GRQVWINFAF PDNDTVQVLD LPSQRIVQTL KPGKGVLHLE FSPRGEQVWL SLRDENRIEI
YDPDTFARIG TLPAQSPSGI FFTVRAHRIG L
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