| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0061 |
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| Symbol | |
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| ID | 3673260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 65522 |
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| End bp | 66826 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637708720 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_313819 |
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| Protein GI | 74316079 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.266485 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.550387 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAGT CGCGGGCGCG TACCTTTGCC GCGAGGCTGC GCGCGGCGCG GCCCGACATT
GCCGCGGCGC TCGCGGTCGT CGTCGCGCTC GCGTTCCCGG CGCACGCCGA GGAGACCGAT
TTCGACACCT GGCTCGCGGC ATTTCGCGAC GAGGCACAGG CGCAGGGCAT CTCGCCGGCC
ACGCTGGCCA GCGCGCTCGA CGGTATCGAG CCGGTCGAAC GCGTGATCGA GCTCGACCGC
CGCCAGCCTG AATTCCTGCA GACCTTCGCC GCCTATCTGG CGCGGCGCGT CACGTCGGAA
CAGGTCGACC GCGGCCAGAC GATGCTGGAG GCGCACGCGG ATCTGTTCGA CGCGGTCGAA
ACGCGCTACG GCGTCGCGGC CAACGTGCTC GCCGCGTTCT GGGGTCTGGA AACGCGTTAC
GGCGCGTTCA AGGGCGGCCT CAACATTCCC GCGAGCCTCG CCACCCTCGC CTACGACGGC
CGTCGCAGTG CCTTCTTTCG CAAGGAACTG CTCGATGCGC TGCGCATCAT CGACGCGGGG
CACGTGACCG CGCCCGAGAT GAACGGCTCG TGGGCCGGCG CCATGGGGCA CATGCAGTTC
ATGCCATCGA CGTTTCGCGC CTACGCGGTC GACGCCGACG GCGACGCGCG CATCGACCTC
TGGCAATCGC TGCCCGACGC GATGAATTCG GCGGCGAATT ACCTGAGCCG TGCCGGTTGG
CGCAGTGGCG AGCCCATCGC GGTCGAGGTC ACGCTGCCGC CCGACTTCGA TCTGCGTAAA
GCCCGGGCCG GCCATCGCCA GCCGGTCGCG GACTGGGCCG CCGCCGGCGT GCGCGCCGCA
TCGGGATGCA CGCTGCCGCA GGTGAACGGC AAGGCCGGGA TTGTCCTGCC GCAGGGGTGG
GAGGGGCCGG CCTTCATGGT GTTCGACAAC TTCGACGTCG TGATGCGGTG GAACCGCTCG
GTCAGCTACG CGCTGACGGT CGCGCAACTC GCCCAGCAAC TCGCGGACGG CGACGGCCTC
GTGCATCCGG CGGTCGAGGA AGCGGCGCTC AGCCTCGTGC AGGTGAAACT GCTGCAGCAG
GCGCTCAACG AGCTCGGCTT CGACGCCGGC GAACCGGATG GCGTGCTCGG GCCGCAGACG
CAGGCCGCGC TGCGCCGCTA TCAGGTCGTG CATGCACTGC CGGCCGACGG CTACCCGGGC
AGTGCCGTCA TGGCCCACGT CGCACGGACC CACGCGGCCG CGTTCCCGCG CGCCGAGCCC
GAACCGGAAG CGGAGCCGCC GAGCTTCGAC GTCAACCCGC ACTGA
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| Protein sequence | MSESRARTFA ARLRAARPDI AAALAVVVAL AFPAHAEETD FDTWLAAFRD EAQAQGISPA
TLASALDGIE PVERVIELDR RQPEFLQTFA AYLARRVTSE QVDRGQTMLE AHADLFDAVE
TRYGVAANVL AAFWGLETRY GAFKGGLNIP ASLATLAYDG RRSAFFRKEL LDALRIIDAG
HVTAPEMNGS WAGAMGHMQF MPSTFRAYAV DADGDARIDL WQSLPDAMNS AANYLSRAGW
RSGEPIAVEV TLPPDFDLRK ARAGHRQPVA DWAAAGVRAA SGCTLPQVNG KAGIVLPQGW
EGPAFMVFDN FDVVMRWNRS VSYALTVAQL AQQLADGDGL VHPAVEEAAL SLVQVKLLQQ
ALNELGFDAG EPDGVLGPQT QAALRRYQVV HALPADGYPG SAVMAHVART HAAAFPRAEP
EPEAEPPSFD VNPH
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