| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0060 |
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| Symbol | |
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| ID | 3673259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 63763 |
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| End bp | 65529 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637708719 |
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| Product | asparagine synthase, glutamine-hydrolyzing |
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| Protein accession | YP_313818 |
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| Protein GI | 74316078 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
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| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing)
[TIGR03104] asparagine synthase family amidotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.157876 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.58042 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCGGCA TAGCAGGTGA ATTGCGGTTC GACGACAGGG CGCCCGATGC GGCGACGATG
ACGCGCATGC TCGCGCGGCT CGCCCGCCGC GGACCCGACG CGGAAGGCCA GCACGCAGCG
GGCCCTCTGC GGCTTGGCCA CCGCCGGCTC GCGATCATCG ACCTCTCGCC GCGCTCGGCG
CAGCCGATGG TCGACGCCGC GACCGGGACG GCGCTCGTGT TCAACGGCAC GATCTACAAC
TATCCCGAAC TGCGCGCCGA GCTCATCGCG CTGGGCCACG CCTTCCATTC CGACGGCGAT
ACCGAGGTCA TCCTGCGCGC CTACCTCGAA TGGGGCGAGC GCTGCGTCGA GCGGTTGCAC
GGCATGTTCG CGTTCGCGAT CTGGCACCGC GACGAACTCT TCCTCGCGCG CGACCGGCTC
GGCATCAAGC CCCTCTATTA CAGCGAAAAC GCCGGCAGCC TGCGCTTCGC CTCGACGCCG
CAGGCCTTGC TCGCCGCGGG CGAGGTCGAC ACCGGGCTCG ACGCCGTCGC CCTGCATCAC
CTGTTCACGC TGCACGCCGT CGTGCCGGCG CCGCGCACGA TCCTCAACGG CGTGCGCAAG
CTCGCTCCGG GGACGACGCT GACCGTTAAT CTACGCGGCG AGTTGCGCCA CCGCAGTTAC
TGGAGCCTGC ACGCGCAACG TCCGGCCGAA ACCAGGAGCG AAGCCGAGTG GACCGACGCG
ATCCACGACG CGCTGCGGCG CGCGGTGCAG AAACGCATCG AGATCGCCGA CGTCAAGGTC
GGCGTGCTGC TTTCCGGCGG ACTCGATTCG AGTCTGCTCG TCGCGCTGCT CGCCGAGCTC
GGCGTCTCCG ACCTCATGAC CTTTTCGGTC GGCTTCGAGG ACCATCCCGA GGAGCGCGGC
AACGAATTCG AATACTCCGA CCCGGTCGCG GCGATGTATG GCACGCGGCA CCACAAGTAT
CTGATCCCGA ATTCGGAAGT GCTGCGGCGT CTGCCCGAGG CCGTCGGCGA GATGTCCGAG
CCGATGTTCG CGCAGGACGC GGTCGCCTTC TACCTGCTCG CCGAGCAGGT CAGCAGGACC
GTCAAGGTCG TGCAGAGCGG CCAGGGCGCC GACGAGGTGT TCGGCGGCTA CTTCTGGTAT
CCGCGCATGG CGGCCGAGGC CGAAGGCAGC GCGCTCGACC GCTTCCGCCG CCATTATTTC
GACCGCGACC ACGCCGAGTT TCTCGAACTC GCCGACCCGC GCTACCACGG ACCCGATTAC
ACCGGCGAGC TCATCGCCGC GCGTCTCGCG GAACCTTTCG CCGACGAATT CATCGACCAG
GTATTGCGGA CGGACACGAC GATGCTGATC ACCGACGACC CGGTCAAGCG GGTCGACAAC
ATGACGATGG CCTGGGGGCT CGAGGCGAGG GTGCCGTTCC TCGACCACAC GCTCGTCGAG
CTCGCGGCGA CGATGCCGCC CGCGATGAAG CTCGCGTCCG AAGGCAAGCA CGTGTTGAAG
CGCATCGCGC GCGGCCGCGT CCCGGACGCC GTGATCGATC GCAAGAAAGG CTATTTCCCG
ATGCCGGCAC TCAAATACGT ACGCGGCGAG TTTCTCGACT TCATGCGCGA CATCCTCGAT
TCACAGGCCT GCCGCCAGCG CGGCCTCTAC CGGCGCGCCT ACGTCGAGCA CCTGCTCGAC
GCGCCCGAAC AGCATCACAC CCGCATCCAG GGCAGCAAGC TCTGGCATCT CGCGCTGCTC
GAATACTGGC TGCAGACGCA TGTCTGA
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| Protein sequence | MCGIAGELRF DDRAPDAATM TRMLARLARR GPDAEGQHAA GPLRLGHRRL AIIDLSPRSA
QPMVDAATGT ALVFNGTIYN YPELRAELIA LGHAFHSDGD TEVILRAYLE WGERCVERLH
GMFAFAIWHR DELFLARDRL GIKPLYYSEN AGSLRFASTP QALLAAGEVD TGLDAVALHH
LFTLHAVVPA PRTILNGVRK LAPGTTLTVN LRGELRHRSY WSLHAQRPAE TRSEAEWTDA
IHDALRRAVQ KRIEIADVKV GVLLSGGLDS SLLVALLAEL GVSDLMTFSV GFEDHPEERG
NEFEYSDPVA AMYGTRHHKY LIPNSEVLRR LPEAVGEMSE PMFAQDAVAF YLLAEQVSRT
VKVVQSGQGA DEVFGGYFWY PRMAAEAEGS ALDRFRRHYF DRDHAEFLEL ADPRYHGPDY
TGELIAARLA EPFADEFIDQ VLRTDTTMLI TDDPVKRVDN MTMAWGLEAR VPFLDHTLVE
LAATMPPAMK LASEGKHVLK RIARGRVPDA VIDRKKGYFP MPALKYVRGE FLDFMRDILD
SQACRQRGLY RRAYVEHLLD APEQHHTRIQ GSKLWHLALL EYWLQTHV
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