| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0056 |
|---|
| Symbol | |
|---|
| ID | 3673255 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 58176 |
|---|
| End bp | 59510 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637708715 |
|---|
| Product | signal transduction protein |
|---|
| Protein accession | YP_313814 |
|---|
| Protein GI | 74316074 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.680301 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.542378 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTGAACC GTCTTGTCGG AATGTTCTCG GGTAAGGATA GCGAGGCCGA TCCGCCGGCA
CGGCCCGCGC CGGCAAAGGC GGAGACCGCG CCCGCCAGGC CGCCCTCGGT CATGCGCCGC
GAGGCGATGC TGGGGCGCGA CCAGAAGGTC GCGGGCTACA CCTTCATGCT GCGGCGTTCG
GCCGACGAAG AGCACGACCC GGCCCTTCCC GAGGTGCGCC GCCTCTACGA CGAGACGTTG
CTCGCCAACC TGCAGGGCAT GGACGTGTCG CGCCTGCTCG GACAGCGCCA GGCCTTCATC
CCGATCGTGC CGGAGACGCT CGGTCACGCC CTGATCGAGA ACTGGCCCGC CGCGGGCACC
GTCTGGCTGC TCAAGCTCGA CGCCGAGACC GCCATCGACG CCGCCCTGCT CGCGCGCGTG
GCCGCGCTCA AGGCGCATGG CTTCGGCTTC GCCCTCGAAT TCGAGGGGGT GACGCGGCCG
GAGCGCCATG GCCTGCTGCA GCAGGCGGAC TACGTGCTGA TGGAGGTCGG CAGCGAAGAC
ATCCCGGCGA TCACGGCGCA GATGGCCGCG GTCTCCAAGA TCGCCGCGGG CAAGCGCTTC
GTCGCCGTCG GCGTGCAGAC GCTGGAAGCC TTCCACATGT GCCACAAGCT CCAGTTCGCG
CTCTTCATGG GGCCTTTCAT CACGCGTCGT GAACACCTCG GCAACCCGGT CGTCGGGCCG
TCGCGCGCGA AGGTGCTGGA CCTCATGAAC CGGGTGCGCA CCGGCGCCGA GCAGGCCGAG
CTGGCCGCCC AGTTCCGCCA CGATCCCGCG CTCTCGGTGC GCCTGCTGCG CTACGTCAAT
TCGCCCGGCA TGGGGCTCAT GAACAAGGTC GGCGGCATCG AACAGGCCTT GATGGTCATG
GGCCACGACA AGCTCTACCG CTGGCTGACG CTGATCCTCT TCACCGGCGG CCAGGCGCAG
GAACTCGACC ATGCGGTCCT CGAAAACGCC CTCGTGCGCG GTCGGGTCGC CGAACAGCTC
GCCGGCCGCG CGCTGTTCGC CAAGGCGCGC GACGAAATTT TCGTCGCCGG ACTGTTCTCG
CTGCTCGACG TCGTCATGCA CATGCCGATG GATCAGGTGC TCAAACAGAT CAGCCTGCCG
GTCGAGATCA GCGAAGCGAT CCTCGCGCAG CGCGGGCCTT ACGCGCCGTA TGTCGCGCTC
GCGATCGCCT GCGAGCAGGA CGACCAGAGC AGTATCGAGA CGCTCGCGCG CGCGGTCAAT
CGCGACGTTG CCGACATCAA CCGCGTGCAC ATGGACGCGC TGTTGTGGGC GGAGCAGCTC
TCGGCCGACG TATGA
|
|---|
| Protein sequence | MLNRLVGMFS GKDSEADPPA RPAPAKAETA PARPPSVMRR EAMLGRDQKV AGYTFMLRRS
ADEEHDPALP EVRRLYDETL LANLQGMDVS RLLGQRQAFI PIVPETLGHA LIENWPAAGT
VWLLKLDAET AIDAALLARV AALKAHGFGF ALEFEGVTRP ERHGLLQQAD YVLMEVGSED
IPAITAQMAA VSKIAAGKRF VAVGVQTLEA FHMCHKLQFA LFMGPFITRR EHLGNPVVGP
SRAKVLDLMN RVRTGAEQAE LAAQFRHDPA LSVRLLRYVN SPGMGLMNKV GGIEQALMVM
GHDKLYRWLT LILFTGGQAQ ELDHAVLENA LVRGRVAEQL AGRALFAKAR DEIFVAGLFS
LLDVVMHMPM DQVLKQISLP VEISEAILAQ RGPYAPYVAL AIACEQDDQS SIETLARAVN
RDVADINRVH MDALLWAEQL SADV
|
|---|
| |