Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0034 |
Symbol | |
ID | 3673241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 35262 |
End bp | 37772 |
Gene Length | 2511 bp |
Protein Length | 836 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637708693 |
Product | DNA helicase/exodeoxyribonuclease V, subunit B |
Protein accession | YP_313792 |
Protein GI | 74316052 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3893] Inactivated superfamily I helicase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0563603 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTCGTCC CCAACCATCG CGCCGGACTC GACTTCGCCC GGGCGCTGGC GCGCGAAGCC GGGCGCGCAG CGCTCGTCGC CCCGCAGATC ACGCCCCTCA AGGCCTGGGC CGAGCGCTTC GCCGAAGCTG CTGCCGAGCC GCAGGCACGT CGACTCGCGC GGCTGCACGC GGCCCTGCGC CACAGCGACT GGCTCGGTTC GGTCGACAAG TGGGCATTGG CGAACGAATT GCTGCGGCTC ATCGACGAGC TGTCGGCCGC GCGCGCGCCG GGCGCAACCG GGCAGCCCGT CCTCGACCTT CCGCCGGACG TCTCGCCGGA GCGTGAAGTC GCGCTCATCG AGGCCGTCTG GCGGACGCTC AACGCCGGCG GCGACGACCC GCAGGCGCGT TACGCCGCGG CGCTGGACGC GCTCGCTGCC GACCTCACCC GCGCGCCGCG GCCGATCTTC GGCTACGCGC TCGGCCCGCT CAGCGGCGGC GAGCAGGCCT TTCTCGCGCG TTGCGCCGAC CATGCGCCGC TGACCCTATA CGAAGGCGAC GCCGACGACC CCGTCGCCTT GACCCTGCGG CAGGCCTGGC TCGCCACCGA GCCGCCGCTG CAGGCACGCG CCACGGCGCT CGCCACGCGC TTCGCCGACT CGCCCGTGGT GGAGCAGATC ACCGTGGCGC CCGCACCGCA TCTTGAAGCG GAGGCGCGCG CCGTCGCGAG CTGGGTCGCC GCGCAACTGC GCGCGGGCAG GCAGGCGCTC GCACTGATCG CGCTCGACCG CGAAACCGCC CGCCGGGTAC GCGCGCTGCT CGAACGCCTC GACGTTCTCG TCGCCGACGA AACCGGCTGG GCGCTTTCGA CGACGGTCGC CGCCGCGGTC GTCGACCGCT GGCTCGAATG CGTGGCCAGC GACTTTCCGC ACGTCGAGCT GCTCGACCTG CTCAAGTCGC CTTTCGTGCT TGACGATCCA GCCGCCCGCC AGGACCAGGT TCTGCAGCTC GAACTCGCGC TGCGCCGCCA GCGGGTGGCG CAGGGCGCAG CCGACATCGA GCGCGTTGCG CGGCAGGAGT TCGGCGCGCT CCCCGCATGG CTCGCTTCGC TGTTCGACGC ACGCCAGCGT TTTGCCCGCA CCTCCGCCCC GCTCGCGCTC TGGCTGCAGC GACTCGCCGA CAGCCTCGAC CAGCTCGCCG CCCGGGCACC GCTCGAAGCC GACGCCGCCG GCGCCCGCGT GTTGGAGACG CTCGCCGCAC TCGGTCGCGA TCTCGCGCAA GACTCCGAAA AATACGACTT CAACGAATGG CGGCGCTGGC TCGGTCTCGC ACTCGAGTCG GCGAGCTTCG TCGACGCCGG CGTCGACAGC CCGATCGTGT TGACGTCGCT GCCCGCCGCG CGCGGACGCA GCTTCGATGC CATCGCGGTG ATCGGCGCAG ACGCCCGTCA CCTGCCCGCA CTACCCACGC CGGGCCTGTT TTCGCAAGCC ACGCGCCGCC AGCTCGGTCT GCGCACGAGC GCGGACGACG CCGCCGACGC CGTCACCGAC CTCATCGCAT TGCTCGGCCA GGGACCTGCA CTCCTGAGTT GGCGCGCATG GAACGACGAC GAGCCCAACC CGGCGTCGCC GCTCGTTCTG CGCCTCCAGG CCCTGCACCT CGCGGCGTGG AGCAGCGCCC TGCCCGAGCA GGGTATCGGC GAGCCGCCCG CCCGGGCGAG CACGCTGCCC GGACGCTGCA CGCGCCCGGC GCCGGTCGTG CCCGCTGCGC GACTGCCGCG GCGCTATTCG CCGACGGCCT ATCAGACACT GCTCGATTGT CCTTACCATT TCTTCGCCCG CGCCGTACTC GGCATCCGCG AACTCGACGA AGCCGACGAT GCGCTCGACA AGAGCGACTA CGGCAACGCG CTGCACCGGA TCCTCAAGCG CTTCCACGAC GGCGACCCGC CGCACGATCC CGCGCAGGCG CTGGCCTTGC TCGACGCCTG CGCGGAGGCC GAATTCGCGG CGCTGCCCGC GTATACGGCC GCGGCCTGGC GCAGCAAGTG GAGCGCGATC GCGCCGGCCT ACGTCGACGC CTGGCTCGAG TGGGCGGGCG AAGGCTGGCG CCATGCGTCG AGCGAATCGG AGTTCGCGGT CGCGGTCGCG GTCGCCGGCC TCGGCGAAGT CACGCTGCAC GGCCGCGTCG ACCGCGTCGA CCGCCGCGGC GACGCGCTCG CCGTGATCGA CTACAAGACC GGCAGCGCGC AAGGCCTGAA GAAGAAGCTC AGGATGCCGG ACGAAGCCGT GCAGCTGCCG TTCTATGCCT GGCTGTGCAA CGCGCGCGCC GCCTACCTGC CGATCAACGA AGCGCCCGTC GCCCCGCTCG AACTCGACGG CGAGACCGAC GTCGACGCAA TCAGCCGCCG TCTGCCCGAA CTGCTCGCGG CGCTCGCCGC CGGCGCGCCG CTACCGGCGG GCGGGGTCGA GGCCGACTGC CGGTACTGCG CGGTGCGCGG CCTGTGCCGC AAGGGCATGT GGCATGCGTG A
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Protein sequence | MLVPNHRAGL DFARALAREA GRAALVAPQI TPLKAWAERF AEAAAEPQAR RLARLHAALR HSDWLGSVDK WALANELLRL IDELSAARAP GATGQPVLDL PPDVSPEREV ALIEAVWRTL NAGGDDPQAR YAAALDALAA DLTRAPRPIF GYALGPLSGG EQAFLARCAD HAPLTLYEGD ADDPVALTLR QAWLATEPPL QARATALATR FADSPVVEQI TVAPAPHLEA EARAVASWVA AQLRAGRQAL ALIALDRETA RRVRALLERL DVLVADETGW ALSTTVAAAV VDRWLECVAS DFPHVELLDL LKSPFVLDDP AARQDQVLQL ELALRRQRVA QGAADIERVA RQEFGALPAW LASLFDARQR FARTSAPLAL WLQRLADSLD QLAARAPLEA DAAGARVLET LAALGRDLAQ DSEKYDFNEW RRWLGLALES ASFVDAGVDS PIVLTSLPAA RGRSFDAIAV IGADARHLPA LPTPGLFSQA TRRQLGLRTS ADDAADAVTD LIALLGQGPA LLSWRAWNDD EPNPASPLVL RLQALHLAAW SSALPEQGIG EPPARASTLP GRCTRPAPVV PAARLPRRYS PTAYQTLLDC PYHFFARAVL GIRELDEADD ALDKSDYGNA LHRILKRFHD GDPPHDPAQA LALLDACAEA EFAALPAYTA AAWRSKWSAI APAYVDAWLE WAGEGWRHAS SESEFAVAVA VAGLGEVTLH GRVDRVDRRG DALAVIDYKT GSAQGLKKKL RMPDEAVQLP FYAWLCNARA AYLPINEAPV APLELDGETD VDAISRRLPE LLAALAAGAP LPAGGVEADC RYCAVRGLCR KGMWHA
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