Gene Tbd_0027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0027 
Symbol 
ID3671988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand- 
Start bp27478 
End bp28416 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content71% 
IMG OID637708686 
Producthypothetical protein 
Protein accessionYP_313785 
Protein GI74316045 
COG category[F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0352] Thiamine monophosphate synthase
[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID[TIGR00586] mutator mutT protein
[TIGR00693] thiamine-phosphate pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.132128 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCGG CCGTCGTCGA GGTCGTCGCC GCGGTCCTGA CCCAGCCAGA CGGCCGCGTG 
CTGCTCGCGC AACGCCCCGC GGGCAAGGTA TACGCCGGTC ATTGGGAATT CCCGGGAGGC 
AAGGTCGAGG CGGGCGAAAC GCTCGAAGAC GCGCTCGTCC GCGAACTGCG CGAGGAACTC 
GGGATCACGG TCAGCGCCGA CTGTCGCTGG ATCACCCGCG TGTTCGAATA TCCCCACGCG 
ACGGTGCGGC TGAACTTCTT TCGCGTGTTC GCGTGGCAGG GCACGCCGCA CCCGCACGAA 
GGCCAGGTCT TTTCCTGGCA GCGGCCCGAA GCGGTCGAAG TGACGCCGCT CCTGCCCGCC 
AATTTTCCGA TCGTGAAAGC CTTGTCGCTG CCGCCGGTGC TCGGCATCAG CCAGGCCGAG 
ACCCTCGGCG CCGACAGCTT TCTCGCCCGG CTCGACGTCG CGCTCGCCGA GGGCCTGCGG 
CTCATCCAGG TGCGTGACAA ATCCCTGCCC GAGGACGAGC GCCTCCATCT CGCGCGCGAA 
ACGGTCCGCC GCGCGCGCCG CCATGGCGCG CGCGTACTGG TGAACGGCAG CGCCGATCTC 
GCGCAGGCCG CAGATGCCGA CGGCGTCCAC CTCGACGCCG CCGCCGCAGC CCGCTGCAGC 
GTGCGGCCCG ATTGCGAATG GGTCGGCGTG TCGTGCCACG ATGCGGATGA ACTGGCGCAG 
GCGGCAGCGA TCGGCGCCGA CTTCGCGCTG CTCTCGCCCG TACTGCCCAC ACTCACCCAC 
CCGGGCGCGC CGACGCTCGG ATGGGCGCGC TTTTCCGCGC TCGCGGCGGC GAGCCCGATC 
CCGGTCTACG GCCTCGGCGG GCTAGCGCGC GACGACGTCG CGCTGGCTCG CACGCGCGGC 
GCGCACGGTG TCGCTTTGCT GCGCGGGGCC TGGACATGA
 
Protein sequence
MNAAVVEVVA AVLTQPDGRV LLAQRPAGKV YAGHWEFPGG KVEAGETLED ALVRELREEL 
GITVSADCRW ITRVFEYPHA TVRLNFFRVF AWQGTPHPHE GQVFSWQRPE AVEVTPLLPA 
NFPIVKALSL PPVLGISQAE TLGADSFLAR LDVALAEGLR LIQVRDKSLP EDERLHLARE 
TVRRARRHGA RVLVNGSADL AQAADADGVH LDAAAAARCS VRPDCEWVGV SCHDADELAQ 
AAAIGADFAL LSPVLPTLTH PGAPTLGWAR FSALAAASPI PVYGLGGLAR DDVALARTRG 
AHGVALLRGA WT