| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0021 |
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| Symbol | |
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| ID | 3673856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 22630 |
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| End bp | 24096 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637708680 |
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| Product | trk system potassium uptake membrane protein TrkH |
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| Protein accession | YP_313779 |
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| Protein GI | 74316039 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
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| TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.432233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.139805 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCTGT TCTCGCGGCT CGTTCCCGTG CTGCACGTGC TCGGGCTGGT GGTGCTGATC
TTTTCGTTCA CCATGCTCGT GCCGCTGGTG ACCGCGGTAT TCGGCGCCGA CGCCGCGCAG
CATGCCTTCG ACGAGGCCTT TCTGATCACC TTGGGCTTCG GCGTCGCGTT GTGGGCTGCC
GGGCGCCGCT GGAAGCGCGA GCTGAAGCCG CGCGACGGCT TCCTGCTGGT GATCCTGGTG
TGGACCGGCC TGCCCGCGTT CGCGACCTTG CCGCTCCTGA TCTACGCGCC GCAGATGAGC
TTCACCGACG CCTACTTCGA GATGATCTCG GCGCTGACGA CGACGGGCGC GACCGTGATG
AGCGGGCTCG ATACGCTGCC GCCCTCGCTC AACCTCTGGC GCCATCTGCT GCAGTGGCTC
GGCGGCATGG GCATCATCGT GCTCGCGGTC GCGATCCTGC CGCTCCTCGG CGTCGGCGGC
CGACAGCTCA TGAAGGCCGA ACTGCCCGGC CCGATCAAGG ACAGCAAACT CACGCCGCGG
ATCGCCGATA CGGCGAAGCT GCTGTGGGCC GTCTACGCCG TCCTGACAGG GCTGTGTGCG
AGCGCGCTGA AGCTTGCCGG CATGAGCTGG TTCGACGCCG TCTGCCATGC CTTCGCTGCG
CTGAGCCTAG GCGGATTTTC CACGCACGAT GCGAGCGTCG GGCACTTCGA TTCGCCGCTG
ATCGAGGGGG TGCTGATCGT CTTCATGCTC GCCGCCGCGG TCAATTTCGT CACCCATTTC
CTGGCCTTTC GGCACAGGAG CCTCGTTCCC TACCGGCGCG ACCCCGAGGC CTTCGGTGTG
CTCGGGCTCG TAATCGGGAG CATCCTCGTC GTCGCCGGCT ACATCTGGCA TGCCGGCGCG
TACCCCGACT ACCTCACGGC GCTGCGTCAC GTCGCGTTCA ACCTCGTCTC GCTCGCGACG
GACTGCGGGT TCGCGAGCAC GGACTACGGC GTGTGGCCGA TGTTCGCGCC GATGTGGATG
CTGTTCCTGT CCTGCGTGAC GGCGAGCTCG GGCTCGACGG GCGGAGGCCT CAAGATGCTG
CGCGCCGTGT TGATGTTCCG CCAGGGCATG CGTGAACTCG AGCGCCAGCT GCACCCGGCG
GCGCGCCTGC CGATCAAGAT CGGCGGCCAT CCCGTATCGA ACCAGATCGT GTTCGCCGTG
CAGGCCTTCG TCATGATGTA CGTCGCGACC GTGATCGCGA TGACGCTCGT GCTGCTCGCG
AGCGGACTCG ACTTCGTCAG TGCGTTTTCG GGCGTCGTCG CCTGCCTCAA CAACGCCGGG
CCCGGTCTCG CCGAACTCGG ACCGGCCGGC AACTACGCCG GCCTCGACGA CTACCAGACC
TGGGCGCTCG CGCTCACGAT GCTGCTCGGG CGGCTCGAGC TCTTCACCGT CTTCGTCCTG
CTCACGCGCC GCTTCTGGCG GACCTGA
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| Protein sequence | MLLFSRLVPV LHVLGLVVLI FSFTMLVPLV TAVFGADAAQ HAFDEAFLIT LGFGVALWAA
GRRWKRELKP RDGFLLVILV WTGLPAFATL PLLIYAPQMS FTDAYFEMIS ALTTTGATVM
SGLDTLPPSL NLWRHLLQWL GGMGIIVLAV AILPLLGVGG RQLMKAELPG PIKDSKLTPR
IADTAKLLWA VYAVLTGLCA SALKLAGMSW FDAVCHAFAA LSLGGFSTHD ASVGHFDSPL
IEGVLIVFML AAAVNFVTHF LAFRHRSLVP YRRDPEAFGV LGLVIGSILV VAGYIWHAGA
YPDYLTALRH VAFNLVSLAT DCGFASTDYG VWPMFAPMWM LFLSCVTASS GSTGGGLKML
RAVLMFRQGM RELERQLHPA ARLPIKIGGH PVSNQIVFAV QAFVMMYVAT VIAMTLVLLA
SGLDFVSAFS GVVACLNNAG PGLAELGPAG NYAGLDDYQT WALALTMLLG RLELFTVFVL
LTRRFWRT
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