Gene Tbd_0008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0008 
Symbol 
ID3673843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp7358 
End bp8500 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content66% 
IMG OID637708667 
Productrhodanese-like protein 
Protein accessionYP_313766 
Protein GI74316026 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.612514 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTTCA CCCTTTTGCC GCTCGTGCTG GTTTCCGCGC TCGCGCAGGC CGAGCCGCTG 
ACCCTCGGCG TCGTGCTCGA TCAGAACGAA TCGATCAGCG ACACGCAGAC CAATCAACGC
TATCGCGCCT TCGTCCGCGA CGTCGAGCGC GCGGTCGGCC AGCCGGTCCG CATGCAGTAC
TACACACGCG GATTCTCGGC GATCAAGCAT GCCAAGGACG GCACGCTCGA CATGGTTTTC
GGCCCGGCCC AGGTGATCGC CAACATCGGC AAGTTCAAGT TCGAGCCGAT CCTCAAGTCG
GGCGAAACGG CCGCGGCGGC CTTCGTCGCC GGTCCCGCAT ACAAGGGTCA GCTCGCCGCG
CGCTCGGGGG CACGTCTCGG CGTTCCCGAC TACGAGTCGC TGATGGGCGG CATGGCGCGC
AGCGAAATCA ACAGCCGCGG CCTCAGCAAG CGCGATTTTT CGGAGATCAA GTTCCATCGC
ATGGCGGAAG CGCCGCTGTA CGGCTTGAAG CTCGGCCGCT ACGACCTCGC GGTCGCGTCG
GCCGAGGAGG CGAAAGCGTG GACGGCAAGC AATGGCGGCC GCATCGTCTT CACGACCGCG
GCCGTGCCGC TGCGCGCGCT TTCGGTCCAG CCCGAGCGGG TGGACGCCGG AATGCGACAG
AAGCTCGCGG CCGGGTTGAC GAAAAACAAC AGCCTTCAGC TTGCGCTCGC CGGCGCGAGC
AAGGCCGACT TCAAGAGCGT CGCGTCGATG CTCAACACCA CGCCGACGGT CCTGCCCGGC
GCCAAGGTCA TCGGCGCCGC CCAGACGCGC GAGCTGATGG CGCAGGGCGT CCCGGTCTAC
GACGTGCGGG TCGGCGAGGA ATACGCCGTG GCGCACGTCC CTGGGGCCAT CTCGGTGCCC
TACAAGGAAG GCAGCGCCAA GGAAGTCGGC TTCGACGCGG CGGACGACCA GTTCGCGCTC
AACAAGCTGC CCAAGGACAA GAACGCGCCC TTCATCATGT ATTGCGACGG CACGATCTGC
TGGAAGAGCT ATAAATCTGC GGTGATGGCG ATCCAGGCCG GCTGGAAGAA CGTCTACTGG
TTCCGCGGCG GCTTCCCGGA ATGGAAGGAA GCCGGCATGC CCGTGATCGC CCGCAAGGAA
TAA
 
Protein sequence
MRFTLLPLVL VSALAQAEPL TLGVVLDQNE SISDTQTNQR YRAFVRDVER AVGQPVRMQY 
YTRGFSAIKH AKDGTLDMVF GPAQVIANIG KFKFEPILKS GETAAAAFVA GPAYKGQLAA
RSGARLGVPD YESLMGGMAR SEINSRGLSK RDFSEIKFHR MAEAPLYGLK LGRYDLAVAS
AEEAKAWTAS NGGRIVFTTA AVPLRALSVQ PERVDAGMRQ KLAAGLTKNN SLQLALAGAS
KADFKSVASM LNTTPTVLPG AKVIGAAQTR ELMAQGVPVY DVRVGEEYAV AHVPGAISVP
YKEGSAKEVG FDAADDQFAL NKLPKDKNAP FIMYCDGTIC WKSYKSAVMA IQAGWKNVYW
FRGGFPEWKE AGMPVIARKE